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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7lzjC_

Fold library idPDB HeaderMoleculeTitle
c7lzjC_2.70PDB header: sugar binding proteinChain: C: PDB Molecule: depolymerase;


Added to library: Sat Aug 28 08:27:53 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LAQPDGFDSIGRVSSFAALRNLKPKKSGQHVLLTSYYDGWAAENKMPTGGGEFISSIGTATDDGGYIAAG
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Known secondary structure (DSSP)

STTGGGGS

B
ST


SSTT


SSS
TTTTT



S
S




SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PGYYWTRVVNNNSFTAEDFGCKTTATPPPNFNVLPAELFDNTAMMQAAFNLAISKSFKLNLSTGTYYFES
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Known secondary structure (DSSP) TT

BTTGGGGT


B



S
TT


SS



S



S

 .........150.........160.........170.........180.........190.........200.........210
Sequence SDTLRITGPIHIEGRPGTVFYHNPSNKANPKTDAFMNISGCSAGRISSINCFSNSYLGKGINFDRSVGDN
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Known secondary structure (DSSP) SS

S



TT

TT
SSTTT

S
TT

SSS
S

SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence RKLVLEHVYVDTFRWGFYVGEPECINQIEFHSCRAQSNYFQGIFIESFKEGQEYGHSAPVHFFNTICNGN
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Known secondary structure (DSSP) TT
SSS
SSSSSTT
S
SSS

TTS



B


S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GPTSFALGATYKTTKNEYIKVMDSVNDVGCQAYFQGLSNVQYIGGQLSGHGSPRNTSLATITQCNSFIIY
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Known secondary structure (DSSP) S

T

TTS
S
S
TT

B
SSBS

TT


BS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GTDLEDINGFTTDGTAITADNIDAIESNYLKDISGAAIVVSSCPGFKIDSPHIFKIKTLSTIKLMNNTYN
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Known secondary structure (DSSP) S
BB
TTS
B

TTSSSSSS
SS
TT



SSSS

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence YEIGGFTPDEALKYNVWDANGLATNRISGVIHPRLVNSRLGINSVAFDNMSNKLDVSSLIHNETSQIVGL
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Known secondary structure (DSSP)




SS
SSS
S



TT



B
GGGTSSSS
B
SBTTGGGT



SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence TPSTGSNVPHTRKMWSNGAMYSSTDLNNGFRLNYLSNHNEPLTPMHLYNEFSVSEFGGSVTESNALDEIK
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Known secondary structure (DSSP) SS
S

SS

S
TT
SS

BS
TTT

S
B
B
S
TTS


TTS




TTS
TTTS

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence YIFIQTTYANSGDGRFIIQALDASGSVLSSNWYSPQSFNSTFPISGFVRFDVPTGAKKIRYGFVNSANYT
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Known secondary structure (DSSP)

S

S
GGG



GGG

TBTTT

TT

SSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence GSLRSHFMSGFAYNKRFFLKIYAVYNDLGRYGQFEPPYSVAIDRFRVGDNTTQMPSIPASSATDVAGVNE
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Known secondary structure (DSSP) TSSSSSS
SS
SSTTSS







TT
T





B







TT
SS
 .........710......
Sequence VINSLLASLKANGFMS
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Known secondary structure (DSSP) TTSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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