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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7lysA_

Fold library idPDB HeaderMoleculeTitle
c7lysA_3.05PDB header: viral protein/rna/dnaChain: A: PDB Molecule: casphi-2;


Added to library: Sat Aug 7 09:44:19 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VESEFSKVLKKHFPGERFRSSYMKRGGKILAAQGEEAVVAYLQGKSEEEPPNFQPPAKCHVVTKSRDFAE
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Known secondary structure (DSSP)



SS




TTT


SS


B

SS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence WPIMKASEAIQRYIYALSTTERAACKPGKSSESHAAWFAATGVSNHGYSHVQGLNLIFDHTLGRYDGVLK
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Known secondary structure (DSSP) STTS
T



SS



SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence KVQLRNEKARARLESINASRADEGLPEIKAEEEEVATNETGHLLQPPGINPSFYVYQTISPQAYRPRDEI
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SS









S
TTS

SS







GGG





TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLPPEYAGYVRDPNAPIPLGVVRNRCDIQKGCPGYIPEWQREAGTAISPKTGKAVTVPGLSPKKNKRMRR
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Known secondary structure (DSSP)


TTSSS



TTSB



S
SSTT
S
SSSSS


GGGTS

SSS



S


SS




 .........290.........300.........310.........320.........330.........340.........350
Sequence YWRSEKEKAQDALLVTVRIGTDWVVIDVRGLLRNARWRTIAPKDISLNALLDLFTGDPVIDVRRNIVTFT
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Known secondary structure (DSSP)

SST

SSS
TTT
S
SS
BTB
S

TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YTLDACGTYARKWTLKGKQTKATLDKLTATQTVALVAIDLGQTNPISAGISRVTQENGALQCEPLDRFTL
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Known secondary structure (DSSP) B
TTTS
B


SS
TTTTS

SSSS
TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence PDDLLKDISAYRIAWDRNEEELRARSVEALPEAQQAEVRALDGVSKETARTQLCADFGLDPKRLPWDKMS
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TTS



TTTS
SSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence SNTTFISEALLSNSVSRDQVFFTPAPKPVEVMRKDRTWARAYKPRLSVEAQKLKNEALWALKRTSPEYLK
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Known secondary structure (DSSP) SS

T

STTT









S



T
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence LSRRKEELCRRSINYVIEKTRRRTQCQIVIPVIEDLNVRFFHGSGKRLPGWDNFFTAKKENRWFIQGLHK
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Known secondary structure (DSSP)

S



GGG




B

SSSTTSSS

B



S
 .........640.........650.........660.........
Sequence AFSDLRTHRSFYVFEVRPERTSIDVATHNLTQVALTGKT
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Known secondary structure (DSSP) S











SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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