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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7luvC_

Fold library idPDB HeaderMoleculeTitle
c7luvC_3.70PDB header: rna binding proteinChain: C: PDB Molecule: tho complex subunit 2;


Added to library: Sat Apr 17 08:32:04 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXEKEDWLRTLFIELFDFINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTISLCKL
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Known secondary structure (DSSP)
TTT


T

T

S


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IPSLHEELFKFSWISSKLLNKEQTTLLRHLLKKSKYELKKYNLLVENSVGYGQLVALLILAYYDPDNFSK
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Known secondary structure (DSSP)
SST
GGGGGG

S





SSSTTTTT
TTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VSAYLKEIYHIMGKYSLDSIRTLDVILNVSSQFITEGYKFFIALLRKSDSWPSSHVANNSNYSSLNEGGN
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Known secondary structure (DSSP) TT

TTTTTTSTTS
SSS


S
TGGGSS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence MIAANIISFNLSQYNYERYMDMCCILLKNGFVNFYSIWDNVKPEMEFLQEYIQNLETELEEEDILLFGKI
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Known secondary structure (DSSP) TT

TTSS
TTTSSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KLLERLLIHGCVIPVIHVLKQYPKVLYVSESLSRYLGRVFEYLLNPLYTSMTDMATALMITRIDNGILAH
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Known secondary structure (DSSP) SS


GGGGGT
ST







SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KPRLIHKYKTHEPFESLELNSSYVFYYSEWNSNLTPFASVNDLFENSHIYLSIIGPYLGRIPTLLSKISR
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Known secondary structure (DSSP)




S
SS

SS
S


STTS




SSTTTTTTTTSTGGGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence IGVADIQKNHGSESLHVTIDKWIDYVRKFIFPATSLLQNNPIATSEVYELMKFFPFEKRYFIYNEMMTKL
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Known secondary structure (DSSP) S
SSSTTTGGGGGG

S
TTTTS
SSSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence SQDILPLKVSFNKAEREAKSILKALSIDTIAKESRRFAKLISTNPLASLVPAVKQIENYDKVSELVVYTT
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Known secondary structure (DSSP) TTSSTTT

TTTTTSSSSG
 .........570.........580.........590.........600.........610.........620.........630
Sequence KYFNDFAYDVLQFVLLLRLTYNRWVQRLSIFIAGLAKNCPNMDISNIITYILKTLHNGNIIAVSILKELI
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Known secondary structure (DSSP) GG

TTS



TT



TTTT

 .........640.........650.........660.........670.........680.........690.........700
Sequence ITVGGIRDLNEVNMKQLLMLNSGSPLKQYARHLIYDFRDDNSVISSRLTSFFTDQSAISEIILLLYTLNL
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Known secondary structure (DSSP)




TT

TT
T

TTTTTTT
STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence ILSTRCDEMNTLLWSFIELIKHCLKGKAFEENVLPFTPWTFHIWRDYLDNXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
TT

SSS



TTTTT

TT

 .........780.........790.........800.........810.........820.........830.........840
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

TTSSTT


SSTT

SST

 .........850.........860.........870.........880.........890.........900.........910
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) T

T

TT

TT

 .
Sequence X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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