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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7lsyY_

Fold library idPDB HeaderMoleculeTitle
c7lsyY_8.40PDB header: dna binding protein/dnaChain: Y: PDB Molecule: dna ligase 4;


Added to library: Sat Apr 17 08:38:12 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNDVTDSFYPAMRLILPQLERE
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Known secondary structure (DSSP)


STTTSB

S






SSGGG

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDL
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Known secondary structure (DSSP) S


S

T

TTSTTTS



TT
TTT



S

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDL
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Known secondary structure (DSSP) TT
TS
T



SS

TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence EKVCRQLHDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYF
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Known secondary structure (DSSP) T
SSS


S




TT







STTTTTS


STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SRNGYNYTDQFGASPTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMDLQTCYC
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Known secondary structure (DSSP) TTS
B

SSTTSSSSTTTB
TT

TTTT
SSTT

TT



 .........360.........370.........380.........390.........400.........410.........420
Sequence VFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQAHTKNEVIDALNEAIDKREEGIMVKQPL
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Known secondary structure (DSSP) TT
SSS
B

BTTT



STT


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSR
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Known secondary structure (DSSP)



TT

GGGSTTS





GGGTTS





TT




 .........500.........510.........520.........530.........540.........550.........560
Sequence VGSGCTMKELYDLGLKLAKYWKPFHRKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCT
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Known secondary structure (DSSP)

SS
GGG


TTS

SS

S


S

GGG


S
SSSTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LRFPRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYSNIFEDVEFCVMSGTQPKPDLENRIAEFG
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Known secondary structure (DSSP) S
TTS
GGGS
BTTTBS







SSTT

B





TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence GYIVQNPGPDTYCVIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAR
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Known secondary structure (DSSP)

SS

SS


SS

STTS
TTTS




GGG

TBTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence EYDCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDSYAVI
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Known secondary structure (DSSP) BS


S
S



S
STTTSTTS

SS
S

STTTSSGGGTTTT


BSST
 .........780.........790.........800.........810.........820.........830.........840
Sequence NDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTD
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Known secondary structure (DSSP) T
TT
B
TTSTTT
SS

TT


S

TTTT
SS

T
 .........850.....
Sequence SIDKCELQEENQYLI
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Known secondary structure (DSSP) TTS


GGGGB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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