PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7lrhD_

Fold library id	PDB Header	Molecule	Title
c7lrhD_	1.92	PDB header: oxidoreductase	Chain: D: PDB Molecule: riboflavin biosynthesis protein ribd;

Links to external resources
Added to library: Tue Jun 21 20:49:04 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R P E V I L K L A L S A D G M I G R K G A G Q V A I T G P V S R A Q S H I L R A Q A D I I L I G I E T A L A D D P V L N C R L P G L E Q R S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T S
S
S
S T T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P V R V V L D G G L R L P L S S R L V R S A D T Q P L W V A C G E E A P D E R R A A L G A A G C R I L A T E T H D I A L P E L L D D L A A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S T T T T S
T T S
T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G I A S V L V E G G A G V A K S F L D E K L V D R L I I F R S P L V I G A A D G V A V E G L E T H I A S E F K I L R R M R Y A D D A C A E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S
S
T T T
T T
S S S S

. . .

Sequence V R N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	P	E	V	I	L	K	L	A	L	S	A	D	G	M	I	G	R	K	G	A	G	Q	V	A	I	T	G	P	V	S	R	A	Q	S	H	I	L	R	A	Q	A	D	I	I	L	I	G	I	E	T	A	L	A	D	D	P	V	L	N	C	R	L	P	G	L	E	Q	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			S			T	T	S							S															S																				S	T	T		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	V	R	V	V	L	D	G	G	L	R	L	P	L	S	S	R	L	V	R	S	A	D	T	Q	P	L	W	V	A	C	G	E	E	A	P	D	E	R	R	A	A	L	G	A	A	G	C	R	I	L	A	T	E	T	H	D	I	A	L	P	E	L	L	D	D	L	A	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T					T	T	S					T	T	T	T	S								T	T	S											T	T																							T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	A	S	V	L	V	E	G	G	A	G	V	A	K	S	F	L	D	E	K	L	V	D	R	L	I	I	F	R	S	P	L	V	I	G	A	A	D	G	V	A	V	E	G	L	E	T	H	I	A	S	E	F	K	I	L	R	R	M	R	Y	A	D	D	A	C	A	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																			T	T			S								S					T	T	T					T	T																	S	S	S	S
	.	.	.
Sequence	V	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)