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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7lgpB_

Fold library idPDB HeaderMoleculeTitle
c7lgpB_1.91PDB header: hydrolaseChain: B: PDB Molecule: succinyl-diaminopimelate desuccinylase;


Added to library: Sat Jan 30 09:22:30 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NAMSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTD
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Known secondary structure (DSSP)
TTT
TS

BTT

TTTT


BTTB
S
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence VVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAH
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Known secondary structure (DSSP) B




GGG
SS
TTS
TTSTTTTTT
TT
SSS
SSS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAA
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Known secondary structure (DSSP) TSTT




S

BSSSTTS


B
TTSGGG
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence PFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKH
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Known secondary structure (DSSP)






SS




S
S
TT
S
TTS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence QLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIH
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Known secondary structure (DSSP) T





SSSS



SS

STTT


SB
TTTT
 .........360.........370.......
Sequence KINECVNAADLQLLARMYQRIMEQLVA
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Known secondary structure (DSSP) STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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