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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7lg1D_

Fold library idPDB HeaderMoleculeTitle
c7lg1D_2.70PDB header: membrane proteinChain: D: PDB Molecule: cgmp-gated cation channel alpha-1;


Added to library: Sat Mar 13 09:11:21 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWLILDYVSDIVYLIDMFVRTRTGYLE
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Known secondary structure (DSSP) -


TTS
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence QGLLVKEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYP
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Known secondary structure (DSSP) TT


TSTS
GGGG
TT
GGGGGGGGGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTLTTIGQ
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Known secondary structure (DSSP)
TTSSSSS


TTSSSTTSTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence TPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVI
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Known secondary structure (DSSP) S



STT

 .........290.........300.........310.........320.........330.........340.........350
Sequence KWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDY
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Known secondary structure (DSSP) TT
SS
TTS
TTTTTTSSSTTTTSSSTT

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFC
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Known secondary structure (DSSP)
SSS



TTSS

TT
S
GGGS

TT
SSSSS
SS
 .........430.........440.........450
Sequence LSKDDLMEALTEYPDAKTMLEEKGKQILMK
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Known secondary structure (DSSP) TS
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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