Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kz9A_

Fold library idPDB HeaderMoleculeTitle
c7kz9A_1.90PDB header: transport proteinChain: A: PDB Molecule: peptide/nickel transport system substrate-binding protein


Added to library: Sat Mar 20 09:15:09 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYDTLVRVDNLGTKMEPGLAESWDISKDGLTYTFKLREA
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

SS



S
GGG

STTTS
BS
TTS
SSS
TTS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KFSDGSPITAEDAAFSLLRIRDNKASLWSDPFSLINTAKATDPKTLVVTLKTPAVAFLSQLASPTVSILS
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) B
TTS
B


TT
S
TTTTSS

TTTSGGGB


 .........150.........160.........170.........180.........190.........200.........210
Sequence EKAMTKMGEDAYAENPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMRMVQNN
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
TTS


SSSTTT
TTSTTGGG


S

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELDTAIFVPFSRVEELKKDKNVVIHSDPSTREDHLLINHEHGLLAKPEVRQALDMAIDKQSLVKTATYGQ
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S
SS


GGGT
TT




TTSGGGGSTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GTVAYSYIPKGSLYHYANNLQRPYDPAAAKKLLADAGAKDLKLNYVVNAGNEADEQIAVIIKDQLAKVGV
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)


SSS
TTSTT

TT






TT
TT
TT
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TANLQKVDPTQSWQMLVDGTYDISVMYWTNDILDPDQKTTFVLGHDTNQNYMTRYKNDQVKALVAAARIE
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TTTT

S

SSSSTS
STTT




 .........430.........440.........450.........460.........470........
Sequence ADPAKREQMYIDLQKLAKQDVNWIDLYYSPYINISRKNVSNFLQNPLGRFTLEEVVKN
Predicted secondary structure















SS confidence

























































Known secondary structure (DSSP)

TSS

TT


B
TTS
B
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D