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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kybA_

Fold library idPDB HeaderMoleculeTitle
c7kybA_3.20PDB header: translocaseChain: A: PDB Molecule: phospholipid-transporting atpase dnf1;


Added to library: Sat Jan 9 21:29:00 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFLPKNILFQFHNFANVYFLVLIILGAFQIFGVTNPGLSAVPLVVIVIITAIKDAIEDSRRTVPTKKSRI
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Known secondary structure (DSSP)

TSTT

S
S
TTGGG





 .........80.........90.........100.........110.........120.........130.........140
Sequence SRELNFSVVINFVLLFILCFVSGIANGVYYDKKGRSRFSYEFGTIAGSAATNGFVSFWVAVILYQSLVPI
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Known secondary structure (DSSP)
S
STS




SSTT
SSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLYISVEIIKTAQAAFIYGDVLLYNAKLDYPCTPKSWNISDDLGQVEYIFSDKTGTLTQNVMEFKKCTIN
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Known secondary structure (DSSP) S
STT
BTTTTB



S
TT
TTSTTT


STTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVSYGRAYTEALAGLRKRQGIDVETEGRREKAEIAKDRDTMIDELRALSGNSQFYPEEVTFVSKEFVRDL
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Known secondary structure (DSSP) T




TS



SS

GGG




 .........290.........300.........310.........320.........330.........340.........350
Sequence KGASGEVQQRCCEHFMLALALCHSVLVEANPDNPKKLDLKAQSPDEAALVATARDVGFSFVGKTKKGLII
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Known secondary structure (DSSP) TSS
SS

B

B
SS
SS
B

B
SST




SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EMQGIQKEFEILNILEFNSSRKRMSCIVKIPGEPRALLICKGADSIIYSRLSRQSNSEAILEKTALHLEQ
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Known secondary structure (DSSP) TT

TTTT




T

SSSS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence YATEGLRTLCIAQRELSWSEYEKWNEKYDIAAASLANREDELEVVADSIERELILLGGTAIEDRLQDGVP
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Known secondary structure (DSSP) T
S

S
TT


TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DCIELLAEAGIKLWVLTGDKVETAINIGFSCNLLNNEMELLVIKTTGDDVKEFGSEPSEIVDALLSKYLK
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Known secondary structure (DSSP) TT

SS
TTSS
SS





SSTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence EYFNLTGSEEEIFEAKKDHEFPKGNYAIVIDGDALKLALYGEDIRRKFLLLCKNCRAVLCCRVSPSQKAA
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Known secondary structure (DSSP) SS

SSTT

S


S
SSSSS

 .........640.........650.........660.........670.........680.........690.........700
Sequence VVKLVKDSLDVMTLAIGDGSNDVAMIQSADVGIGIAGEEGRQAVMCSDYAIGQFRYLARLVLVHGRWSYK
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Known secondary structure (DSSP) TTT


STSS

SS
TTTTTTSSSSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence RLAEMIPEFFYKNMIFALALFWYGIYNDFDGSYLYEYTYMMFYNLAFTSLPVIFLGILDQDVNDTISLVV
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Known secondary structure (DSSP) GGGTT



SS
TTS

SS
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence PQLYRVGILRKEWNQRKFLWYMLDGLYQSIICFFFPYLVYHKNMIVTSNGLGLDHRYFVGVYVTTIAVIS
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Known secondary structure (DSSP) GGGGT
S

STTTTS

STTS



S
 .........850.........860.........870.........880.........890.........900.........910
Sequence CNTYVLLHQYRWDWFSGLFIALSCLVVFAWTGIWSSAIASREFFKAAARIYGAPSFWAVFFVAVLFCLLP
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Known secondary structure (DSSP)
SS

TSTTSSS
TTTT
 .........920.........930.........940.........950.......
Sequence RFTYDSFQKFFYPTDVEIVREMWQHGHFDHYPPGYDPTDPNRPKVTK
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Known secondary structure (DSSP) S

TTT
SS
SS

TT
SS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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