Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ky5B_

Fold library idPDB HeaderMoleculeTitle
c7ky5B_3.98PDB header: translocaseChain: B: PDB Molecule: alkylphosphocholine resistance protein lem3;


Added to library: Sat Jan 9 20:53:29 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEVKNRRPKEDAFTQQRLAAINPVLTPRTVLPLYLLIAVVFVIVGGCILAQNSKVDEVTIYYQDCMTNAT
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)










TTTTT









TT


TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence SSWSDIPSEHWQFVFHKYKTYNTAPQWRFVDDESDDFTKQRGTCQIRFTTPSDMKNNVYLNYVLEKFAAN
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) SS


GGG
SS
TT






TT


TTS
SSS
B
S
S



 .........150.........160.........170.........180.........190.........200.........210
Sequence HRRYVLSFSEDQIRGEDASYETVHDATGINCKPLSKNADGKIYYPCGLIANSMFNDTFPLQLTNVGDTSN
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)

S
SGGGGT



SSSSSS

TTSB
SS

SS
ST




SB
SS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NYSLTNKGINWESDKKRYKKTKYNYTQIAPPPYWEKMYPDGYNETNIPDIQDWEEFQNWMRPGAFDKITK
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)

B
B
TT
S
TGGGGG






SSS

GGGTTT
SS


TT



TTT
TS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LIRINKNDTLPAGEYQLDIGLHWPVLEFNGKKGIYLTHGSHLGGRNPFLGIVYLIGGCICAAMALILLTF
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
SS
B
S
S

GGGT



TTSS

S
 .........360.........
Sequence WLFGGRKIADASSLSWNMK
Predicted secondary structure















SS confidence


















Known secondary structure (DSSP) TT


S

TT
SGGGT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D