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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kveB_

Fold library idPDB HeaderMoleculeTitle
c7kveB_3.30PDB header: blood clottingChain: B: PDB Molecule: coagulation factor v;


Added to library: Sat Mar 13 08:56:53 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQLRQFYVAAQGISWSYRPEPTNSSLNLSVTSFKKIVYREYEPYFKKEKPQSTISGLLGPTLYAEVGDII
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Known secondary structure (DSSP)





SS



SS
SS



BSGGGSSB



TT
SS




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVHFKNKADKPLSIHPQGIRYSKLSEGASYLDHTFPAEKMDDAVAPGREYTYEWSISEDSGPTHDDPPCL
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Known secondary structure (DSSP)

SSS
B

B

SS


TTSS



S



TTTTTTT
B
TT



SSSS

SSS
SB
 .........150.........160.........170.........180.........190.........200.........210
Sequence THIYYSHENLIEDFNSGLIGPLLICKKGTLTEGGTQKTFDKQIVLLFAVFDESKSWSQSSSLMYTVNGYV
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Known secondary structure (DSSP)


SSTTTTTTTT
B
TTT

SSS

SS
S





GGGSSS







BTTBS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NGTMPDITVCAHDHISWHLLGMSSGPELFSIHFNGQVLEQNHHKVSAITLVSATSTTANMTVGPEGKWII
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Known secondary structure (DSSP) TT
S


SS
SS

TT


BBTTB

S

SS



SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SSLTPKHLQAGMQAYIDIKNCPKKTRNLKKITREQRRHMKRWEYFIAAEEVIWDYAPVIPANMDKKYRSQ
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Known secondary structure (DSSP)
STTTTTS






TT






SSTTT



SS

B




SS
SS
SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence HLDNFSNQIGKHYKKVMYTQYEDESFTKHTVNPNMKEDGILGPIIRAQVRDTLKIVFKNMASRPYSIYPH
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Known secondary structure (DSSP) TSTTTTSS
S




B

SSTT


BS
SS

SS
SS



TTS



SSS
B

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence GVTFSPYEDEVNSSFTSGRNNTMIRAVQPGETYTYKWNILEFDEPTENDAQCLTRPYYSDVDIMRDIASG
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Known secondary structure (DSSP) S



TTS

S

S



STT




B
TT







TTS


TTS
SS

SST
 .........500.........510.........520.........530.........540.........550.........560
Sequence LIGLLLICKSRSLDRRGIQRAADIEQQAVFAVFDENKSWYLEDNINKFCENPDEVKRDDPKFYESNIMST
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Known secondary structure (DSSP)


S

SSTT


SS
S

GGGSTTS




SS
S

TT


SST
 .........570.........580.........590.........600.........610.........620.........630
Sequence INGYVPESITTLGFCFDDTVQWHFCSVGTQNEILTIHFTGHSFIYGKRHEDTLTLFPMRGESVTVTMDNV
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Known secondary structure (DSSP) SSS

S

SS




SS

SS





S

B
BTTB



TT





 .........640.........650.........660.........670.........680.........690.........700
Sequence GTWMLTSMNSSPRSKKLRLKFRDVKCIPDDDEDSYEIFEPPESTVMATRKMHDRLEPEDEESDADYDYQN
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Known secondary structure (DSSP) S
B


SSTTTTTT
B

B




SSSS
SSSS


SS

S
TTS

TT



SSSSS
SS

SS

S
 .........710.........720.........730.........740.........750.........760.........770
Sequence RLAAALGIRSFRNPDNIAAWYLRSNNGNRRNYYIAAEEISWDYSEFVQRETDIEDSDDIPEDTTYKKVVF
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Known secondary structure (DSSP)





SS












TTSS



SB
GGGTTS


S




S
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence RKYLDSTFTKRDPRGEYEEHLGILGPIIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDS
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Known secondary structure (DSSP) BSSSS
S
B



SGGGS
TT



B

BTT
B
SSS
B



SS
B

GGGT


S

SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence PEWFKEDNAVQPNSSYTYVWHATERSGPESPGSACRAWAYYSAVNPEKDIHSGLIGPLLICQKGILHKDS
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Known secondary structure (DSSP) STTGGGSS
B
TT



GGGS

STT
S


TTSTTT
B

TT


TTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence NMPMDMREFVLLFMTFDEKKSWYYEKKSRSSWRLTSSEMKKSHEFHAINGMIYSLPGLKMYEQEWVRLHL
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Known secondary structure (DSSP) T
S
SS
SSSSS


SS
SS
TTTTTGGGTTTTSSSBS

TT

SS


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LNIGGSQDIHVVHFHGQTLLENGNKQHQLGVWPLLPGSFKTLEMKASKPGWWLLNTEVGENQRAGMQTPF
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Known secondary structure (DSSP)

SS
SS
TT





SSS



SS
TT










TTT


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LIMDRDCRMPMGLSTGIISDSQIKASEFLGYWEPRLARLNNGGSYNAWSVEKLAAEFASKPWIQVDMQKE
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Known secondary structure (DSSP)

S



STTTSSS
GGGSS

TT

GGG
BTT

SS

S

SS

S

SSS




SS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence VIITGIQTQGAKHYLKSCYTTEFYVAYSSNQINWQIFKGNSTRNVMYFNGNSDASTIKENQFDPPIVARY
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Known secondary structure (DSSP)



SSS



SSSSS



SSS
SSSSS





SSS

S
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence IRISPTRAYNRPTLRLELQGCEVNGCSTPLGMENGKIENKQITASSFKKSWWGDYWEPFRARLNAQGRVN
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Known secondary structure (DSSP) SSS



B


SSS


STTTS
S
GGGS


B
SSS
B

TT


TT

SS

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence AWQAKANNNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQGVEWKPYRLKSSMVDKIFEG
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Known secondary structure (DSSP) S


SS

TT



SSSS


SSS


B
TTSSSB




 .........1340.........1350.........1360.........1370....
Sequence NTNTKGHVKNFFNPPIISRFIRVIPKTWNQSIALRLELFGCDIY
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Known secondary structure (DSSP)
SSSS

SS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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