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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ks0A_

Fold library idPDB HeaderMoleculeTitle
c7ks0A_5.30PDB header: signaling proteinChain: A: PDB Molecule: glutamate receptor ionotropic, kainate 5,green fluorescent


Added to library: Sat Mar 27 09:00:34 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARVEVDIFELQRDSQYETTDTMCQILPKGV
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Known secondary structure (DSSP)


B




STT


S

SSS


B



S

GGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence VSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSLAVSRILKSFNYPS
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Known secondary structure (DSSP) S


SS
TT


S


S


SSS


SS

TTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence ASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKA
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Known secondary structure (DSSP) SSTTTTS
BBTTT

TT


TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SELGMTSAFYKYILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEASTYPGP
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Known secondary structure (DSSP) TTTTTSTT


SS
TT


TTT

SS



TT
SSTT

SS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQR
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Known secondary structure (DSSP)
S







SSS



TTTT
TT

TTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence TNYTLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLTLVVTTILENPYVMRRPNFQALSGNERFEGFC
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Known secondary structure (DSSP) BS

TT
SSS
TTSS

TT





TTTSB


TTS
TTTTTT
BS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFM
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Known secondary structure (DSSP) TT


SSSS


B
SSSSB
TT
SS
S

B

TTS
S
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence TLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSVVLFLAARALSTRIVSGVWWAFTLIIISS
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Known secondary structure (DSSP)









S

SS
SS
TTTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence YTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKS
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Known secondary structure (DSSP) S
SS

T
SSSB


STTSTTS

SSTTT




 .........640.........650.........660.........670.........680.........690.........700
Sequence TEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNR
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Known secondary structure (DSSP) SSB
TTSTTS


S



STT
TTSS
 .........710.........720.........730.........740.
Sequence LEILKRKWWEGGMENIGGIFVVLIAGLIIAVFVAVMEFIYK
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Known secondary structure (DSSP) T


TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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