PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7kpxC_

Fold library id	PDB Header	Molecule	Title
c7kpxC_	4.40	PDB header: transcription	Chain: C: PDB Molecule: mediator of rna polymerase ii transcription subunit 12;

Links to external resources
Added to library: Sat Jan 30 08:35:07 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G S G R Y L L T P P D D L H P Y V P S S K P Q E Q V Y P D F K P W E H T A A E D Q I L A N F V A K G F Y H T P M V N F E S I S A R S S V H E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S
T T S
T T S
T T
S T T T
S S S S
S
S S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S L V T Q S N I L S Q Q F D K I I K I R E D H I N K I P S N S T T T L H G P G F Q L P N R I T L T D H R K E T W L H E L S S S H T S L V K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S T S B
S S S S S
S
T S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G K F I P H G L K R R Q V I E Q C Y L K F I P L K R A I W L I K C C Y F I E W K S N H K K K R S N A A G A D D A I S M H L L K D W T D T F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
S
S
T T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Y I L E K L I F D M T N H Y N D S Q Q L R T W K R Q I S Y F L K L L G N C Y S L R L I N K E I F H H W L V E F I N K M E N F E F L P L S L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T T
S
G G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence I L M I F W N D I C Q I D Q K E P F F L V T K I T D M L L H K Y Y I V S S S K S M I N D E N Y I I N D I K K N N K I K L N I L K I L S S L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S T T S
S
S
S S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence L K I F Q E Q S L E V F I F P T S N W E I Y K P L L F E I V S N A D T N Q N S D M K K K L E L I S Y R N E S L K N N S S I R N V I M S A S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
T T S T T S
T T T
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence A N D F Q L T I V T C K Q F P K L S C I Q L N C I D T Q F T K L L D D N P T E F D W P T Y V D Q N P L T M H K I I Q L I L W S I H P S R Q F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T S
T S S
T T T
S S S
T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence D H Y E S N Q L V A K L L L L R I N S T D E D L H E F Q I E D A I W S L V F Q L A K N F S A Q K R V V S Y M M P S L Y R L L N I L I T Y G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T T T T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence I K V P T Y I R K L I S S G L L Y L Q D S N D K F V H V Q L L I N L K I S P L M K S Q Y N M V L R N V M E Y D V K F Y E I F N F D Q L V E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
S T
T T
S S
S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence T E Q I K M R I L S N D I T N L Q L S K T P L S I K I M V A E W Y L S H L C S G I L S S V N R T V L L K I F K I F C I D L E V F H H F F K W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
S S
T S S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence I E F I V Y H Q L L S D I E S L E A L M D I L L C Y Q K L F S Q F I N D H I L F T K T F I F I Y K K V L K E K D V P A Y N V T S F M P F W K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G
S
S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence F F M K N F P F V L K V D N D L R I E L Q S V Y N D E K L K T E K L K N D K S E V L K V Y S M I N N S N Q A V G Q T W N F P E V F Q V N I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
T T T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence F L L H N S E I I D T N T S K Q F Q K A R N N V M L L I A T N L K E Y N K F M S I F L K R K D F T N K N L I Q L I S L K L L T F E V T Q N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence L G L E Y I I R L L P I N L E N N D G S Y G L F L K Y H K E Q F I K S N F E K I L L T C Y E L E K K Y H G N E C E I N Y Y E I L L K I L I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T T S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence Y G S S P K L L A T S T K I I M L L L N D S V E N S S N I L V D E I D H V E Y Y V M M D F A N L W V F Q A F T C F C I K K I M E N N E P A M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence A M E D L K N F I F Q I I E I T N S N D L C S Q I F D Q L K D M Q T I E M I T Q I V E K D F C T S C L Q N N N Q K I D D N Y I V V V I E I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence T S L S M R F Q R E T S G M I V I S M E N Y H L L I K I I R Q L S E L N E G N L S K R E I Q I D A V L K I F S F H Q D S I F Q R I I A D L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence A D K P T S P F I D S I C K L F D K I S F N L R L K L F L Y E I L S S L K S F A I Y S S T I D A P A F H T S G K V E L P K K L L N L P P F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S T T
S S S
T T T T S S
S
S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence V S S F V K E T S F S L N L G I G I V E I A H E N E Q K W L I Y D K K D H K Y V C T F S M E P Y H F I S N Y N T K Y T D D M A T G S N D T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S
T T T T
T T S
S
S
S S S
T

. . . . . . . . . 1340 . . . . . . . . . 1350 . .

Sequence A F N D S C V N L S L F D A R F E R K N P H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S S
G G G T T
B

Download: PDB structure FASTA sequence
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	G	R	Y	L	L	T	P	P	D	D	L	H	P	Y	V	P	S	S	K	P	Q	E	Q	V	Y	P	D	F	K	P	W	E	H	T	A	A	E	D	Q	I	L	A	N	F	V	A	K	G	F	Y	H	T	P	M	V	N	F	E	S	I	S	A	R	S	S	V	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								S	S				S		T	T	S		T	T	S				T	T																	S	T	T	T							S	S	S	S		S			S	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	V	T	Q	S	N	I	L	S	Q	Q	F	D	K	I	I	K	I	R	E	D	H	I	N	K	I	P	S	N	S	T	T	T	L	H	G	P	G	F	Q	L	P	N	R	I	T	L	T	D	H	R	K	E	T	W	L	H	E	L	S	S	S	H	T	S	L	V	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T	S																		T	S	B						S	S	S	S	S		S																							T	S	S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	K	F	I	P	H	G	L	K	R	R	Q	V	I	E	Q	C	Y	L	K	F	I	P	L	K	R	A	I	W	L	I	K	C	C	Y	F	I	E	W	K	S	N	H	K	K	K	R	S	N	A	A	G	A	D	D	A	I	S	M	H	L	L	K	D	W	T	D	T	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T				S															T																								S		S				T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	I	L	E	K	L	I	F	D	M	T	N	H	Y	N	D	S	Q	Q	L	R	T	W	K	R	Q	I	S	Y	F	L	K	L	L	G	N	C	Y	S	L	R	L	I	N	K	E	I	F	H	H	W	L	V	E	F	I	N	K	M	E	N	F	E	F	L	P	L	S	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		S																								T	T	T		S																			G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	L	M	I	F	W	N	D	I	C	Q	I	D	Q	K	E	P	F	F	L	V	T	K	I	T	D	M	L	L	H	K	Y	Y	I	V	S	S	S	K	S	M	I	N	D	E	N	Y	I	I	N	D	I	K	K	N	N	K	I	K	L	N	I	L	K	I	L	S	S	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T					T	T					S	T	T																				S		S		S				S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	K	I	F	Q	E	Q	S	L	E	V	F	I	F	P	T	S	N	W	E	I	Y	K	P	L	L	F	E	I	V	S	N	A	D	T	N	Q	N	S	D	M	K	K	K	L	E	L	I	S	Y	R	N	E	S	L	K	N	N	S	S	I	R	N	V	I	M	S	A	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S						S	S	S											T	T	S	T	T	S															T	T	T															S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	N	D	F	Q	L	T	I	V	T	C	K	Q	F	P	K	L	S	C	I	Q	L	N	C	I	D	T	Q	F	T	K	L	L	D	D	N	P	T	E	F	D	W	P	T	Y	V	D	Q	N	P	L	T	M	H	K	I	I	Q	L	I	L	W	S	I	H	P	S	R	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T								S														T	T	S							T	S	S			T	T	T														S	S	S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	H	Y	E	S	N	Q	L	V	A	K	L	L	L	L	R	I	N	S	T	D	E	D	L	H	E	F	Q	I	E	D	A	I	W	S	L	V	F	Q	L	A	K	N	F	S	A	Q	K	R	V	V	S	Y	M	M	P	S	L	Y	R	L	L	N	I	L	I	T	Y	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S				S	T	T	T																			T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	K	V	P	T	Y	I	R	K	L	I	S	S	G	L	L	Y	L	Q	D	S	N	D	K	F	V	H	V	Q	L	L	I	N	L	K	I	S	P	L	M	K	S	Q	Y	N	M	V	L	R	N	V	M	E	Y	D	V	K	F	Y	E	I	F	N	F	D	Q	L	V	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S															T					S														T		T	T		S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	E	Q	I	K	M	R	I	L	S	N	D	I	T	N	L	Q	L	S	K	T	P	L	S	I	K	I	M	V	A	E	W	Y	L	S	H	L	C	S	G	I	L	S	S	V	N	R	T	V	L	L	K	I	F	K	I	F	C	I	D	L	E	V	F	H	H	F	F	K	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S													T	T	S																				S	S				T													S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	E	F	I	V	Y	H	Q	L	L	S	D	I	E	S	L	E	A	L	M	D	I	L	L	C	Y	Q	K	L	F	S	Q	F	I	N	D	H	I	L	F	T	K	T	F	I	F	I	Y	K	K	V	L	K	E	K	D	V	P	A	Y	N	V	T	S	F	M	P	F	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																			G	G	G																							S				S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	F	M	K	N	F	P	F	V	L	K	V	D	N	D	L	R	I	E	L	Q	S	V	Y	N	D	E	K	L	K	T	E	K	L	K	N	D	K	S	E	V	L	K	V	Y	S	M	I	N	N	S	N	Q	A	V	G	Q	T	W	N	F	P	E	V	F	Q	V	N	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T																S	S					T	T																		T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	F	L	L	H	N	S	E	I	I	D	T	N	T	S	K	Q	F	Q	K	A	R	N	N	V	M	L	L	I	A	T	N	L	K	E	Y	N	K	F	M	S	I	F	L	K	R	K	D	F	T	N	K	N	L	I	Q	L	I	S	L	K	L	L	T	F	E	V	T	Q	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																																				S												T	S								S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	L	G	L	E	Y	I	I	R	L	L	P	I	N	L	E	N	N	D	G	S	Y	G	L	F	L	K	Y	H	K	E	Q	F	I	K	S	N	F	E	K	I	L	L	T	C	Y	E	L	E	K	K	Y	H	G	N	E	C	E	I	N	Y	Y	E	I	L	L	K	I	L	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																S																T	T	T																S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	Y	G	S	S	P	K	L	L	A	T	S	T	K	I	I	M	L	L	L	N	D	S	V	E	N	S	S	N	I	L	V	D	E	I	D	H	V	E	Y	Y	V	M	M	D	F	A	N	L	W	V	F	Q	A	F	T	C	F	C	I	K	K	I	M	E	N	N	E	P	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																																			S	S																			S	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	A	M	E	D	L	K	N	F	I	F	Q	I	I	E	I	T	N	S	N	D	L	C	S	Q	I	F	D	Q	L	K	D	M	Q	T	I	E	M	I	T	Q	I	V	E	K	D	F	C	T	S	C	L	Q	N	N	N	Q	K	I	D	D	N	Y	I	V	V	V	I	E	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	T	S	L	S	M	R	F	Q	R	E	T	S	G	M	I	V	I	S	M	E	N	Y	H	L	L	I	K	I	I	R	Q	L	S	E	L	N	E	G	N	L	S	K	R	E	I	Q	I	D	A	V	L	K	I	F	S	F	H	Q	D	S	I	F	Q	R	I	I	A	D	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T																											T	T														S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	A	D	K	P	T	S	P	F	I	D	S	I	C	K	L	F	D	K	I	S	F	N	L	R	L	K	L	F	L	Y	E	I	L	S	S	L	K	S	F	A	I	Y	S	S	T	I	D	A	P	A	F	H	T	S	G	K	V	E	L	P	K	K	L	L	N	L	P	P	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S	T	T																	S	S	S																					T	T	T	T	S	S													S			S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	V	S	S	F	V	K	E	T	S	F	S	L	N	L	G	I	G	I	V	E	I	A	H	E	N	E	Q	K	W	L	I	Y	D	K	K	D	H	K	Y	V	C	T	F	S	M	E	P	Y	H	F	I	S	N	Y	N	T	K	Y	T	D	D	M	A	T	G	S	N	D	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										S															S								T	T	T	T										T	T	S											S		S		S	S	S				T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.
Sequence	A	F	N	D	S	C	V	N	L	S	L	F	D	A	R	F	E	R	K	N	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		S	S	S		G	G	G	T	T		B