Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kpxB_

Fold library idPDB HeaderMoleculeTitle
c7kpxB_4.40PDB header: transcriptionChain: B: PDB Molecule: rna polymerase ii holoenzyme cyclin-like subunit;


Added to library: Sat Jan 30 08:29:36 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGSFWTSTQRHHWQYTKASLAKERQKLWLLECQLFPQGLNIVMDKNIPITHRDLHYDKDYNLRIYCYFLI
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)


STTSSTTTTS


TT
SS













TTSSSSSSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MKLGRRLNIRQYALATAHIYLSRFLIKASVREINLYMLVTTCVYLACKVEECPQYIRTLVSEARTLWPEF
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) T

S
STTS
TT




SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IPPDPTKVTEFEFYLLEELESYLIVHHPYQSLKQIVQVLKQPPFQITLSSDDLQNCWSLINDSYINDVHL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

S
TTS





TSSTTT




TTSSS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LYPPHIIAVACLFITISIHGKPPKNSSSPVQIAFNRFMAESLVDLEEVMDTIQEQITLYDHWDKYHEQWI
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TS




SS
STS


SSSTTS

 .........290
Sequence KFLLHTLYLR
Predicted secondary structure

SS confidence









Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D