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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kpvC_

Fold library idPDB HeaderMoleculeTitle
c7kpvC_3.80PDB header: transcriptionChain: C: PDB Molecule: mediator of rna polymerase ii transcription subunit 12;


Added to library: Sat Jan 30 08:33:09 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSGRYLLTPPDDLHPYVPSSKPQEQVYPDFKPWEHTAAEDQILANFVAKGFYHTPMVNFESISARSSVHE
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Known secondary structure (DSSP)

S






SS


S
TTS
TTS


TT






STTT





SSSS
S

SSSSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SLVTQSNILSQQFDKIIKIREDHINKIPSNSTTTLHGPGFQLPNRITLTDHRKETWLHELSSSHTSLVKI
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Known secondary structure (DSSP)
SSTTSTSB




SSSSS
S








TSSS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKFIPHGLKRRQVIEQCYLKFIPLKRAIWLIKCCYFIEWKSNHKKKRSNAAGADDAISMHLLKDWTDTFV
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Known secondary structure (DSSP) T
S


T

S
S


TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YILEKLIFDMTNHYNDSQQLRTWKRQISYFLKLLGNCYSLRLINKEIFHHWLVEFINKMENFEFLPLSLH
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Known secondary structure (DSSP) TT
S
TTT
S



GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence ILMIFWNDICQIDQKEPFFLVTKITDMLLHKYYIVSSSKSMINDENYIINDIKKNNKIKLNILKILSSLI
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Known secondary structure (DSSP) TTT



STTS
S
S


SSS


 .........360.........370.........380.........390.........400.........410.........420
Sequence LKIFQEQSLEVFIFPTSNWEIYKPLLFEIVSNADTNQNSDMKKKLELISYRNESFSLNLGIGIVEIAHEN
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Known secondary structure (DSSP)
SS




SSS




TTSTTS
TTT




S













 .........430.........440.........450.........460.........470.........480.......
Sequence EQKWLIYDKKDHKYVCTFSMEPYHFISNYNTKYTDDMATGSNDTTAFNDSCVNLSLFDARFERKNPH
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Known secondary structure (DSSP) S


TTTT



TTS









S
S
SSS


TTTS
SSS
GGGTT
B







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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