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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kdpC_

Fold library idPDB HeaderMoleculeTitle
c7kdpC_3.60PDB header: viral protein/inhibitorChain: C: PDB Molecule: envelope glycoprotein b;


Added to library: Sat Mar 20 08:33:57 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTKYPYRVCSMAQGTDLIRFERNIVCTSMKPINEDLDEGIMVVYKRNIVAHTFKVRVYQKVLTFRRSYAY
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Known secondary structure (DSSP)
TTS

B





SS












SS
S

B











 .........80.........90.........100.........110.........120.........130.........140
Sequence IHTTYLLGSNTEYVAPPMWEIHHINSHSQCYSSYSRVIAGTVFVAYHRDSYENKTMQLMPDDYSNTHSTR
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Known secondary structure (DSSP) SS



SS



B
SS
B



SSS








S


SS

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence YVTVKDQWHSRGSTWLYRETCNLNCMVTITTARSKYPYHFFATSTGDVVDISPFYNGTNRNASYFGENAD
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Known secondary structure (DSSP)

S

S





SSS







TT



SSS

B
TT

TT
TTTS
B
S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KFFIFPNYTIVSDFGRPNSALETHRLVAFLERADSVISWDIQDEKNVTCQLTFWEASERTIRSEAEDSYH
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Known secondary structure (DSSP) S
SSTTSSS




SS















S


B


SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence FSSAKMTATFLSKKQEVNMSDSALDCVRDEAINKLQQIFNTSYNQTYEKYGNVSVFETTGGLVVFWQGIK
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Known secondary structure (DSSP) BB
TTSS
B

B
SS


SS
TT
TT
SSSSBSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QQLQFTYDTLRGYINRALAQIAEAWCVDQRRTLEVFKELSKINPSAILSAIYNKPIAARFMGDVLGLASC
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Known secondary structure (DSSP)

TTT
TS


SSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence VTINQTSVKVLRDMNVKESPGRCYSRPVVIFNFANSSYVQYGQLGEDNEILLGNHRTEECQLPSLKIFIA
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Known secondary structure (DSSP)
B

SS


S

B
SSSTTSS



TT






TTS

S



S


 .........500.........510.........520.........530.........540.........550.........560
Sequence GNSAYEYVDYLFKRMIDLSSISTVDSMIALDIDPLENTDFRVLELYSQKELRSSNVFDLEEIMREFNSYK
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Known secondary structure (DSSP) SSTTS

TTSS

SGGG
S

S






TTT

SSSS


SSTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence QRVKYVEDKVVDPLPPYLKGLDDLMSGLGAAGKAVGVAIGAVGGAVASVVEGVATFLKNPFGAFTIILVA
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Known secondary structure (DSSP) TTS

S
GGG

SSS
 ........
Sequence IAVVIIIY
Predicted secondary structure

SS confidence







Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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