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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kamD_

Fold library idPDB HeaderMoleculeTitle
c7kamD_3.80PDB header: protein transportChain: D: PDB Molecule: protein transport protein sec63;


Added to library: Sat Jan 9 20:54:12 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EYNYDENGQFFPFFVLTLTGLVTLPLTYSLLAPRIKSDFKPQHDDIIQNQKRKRLRKERRVKRAIAVVVG
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Known secondary structure (DSSP)




SSSSSTTT










SS




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence WAIIGYMVYLIIVTRRTAGSYSIGIALPKLIIEEGSGKYVLMLYASLLGILLPYIVGRWWYGSQRYTREK
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Known secondary structure (DSSP) TTT







SS
STTTSTTTSSSB
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLAASAGNMFREYEGTMIGGPIVNALSTGEEYKEMLSGPKAEEGLAKVEKKVLALDEKILSAKDREVLRK
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Known secondary structure (DSSP) SBT

SS

SS

SS
GGGTTTTS
TTT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IDNPVRRKALALLWAYLNRIDLEDPVLNEEKYEAGSIALSLTESFTAIALAFGNLIPIIGAYRISQCIVQ
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Known secondary structure (DSSP)


TTTT


S
TT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AISPGSSPLLQLPYFTPKVVESVEGADVKTHLSVQKYLDMPEERRRSLTVGPGLLTEDQYNSAIAVAKQL
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Known secondary structure (DSSP) T

TTS
GGGGSTT

S
SS
SS


TS
TT
SSSSS

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence PLFAISKAFFKVAGERVVTPSSLVQLVIKGRIIPPGRVQPPLAHAPYLPRDHPPRWHIFLADAKQGKIAV
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Known secondary structure (DSSP)

B


TTSSS

TTS

B




B







SSSS




B


SSS

 .........430.........440.........450.........460.........470......
Sequence PPFTFTTFDKTFNMQTLRMQFQAPPQVGNFSFVLHMISDSYMGFDVKQEITLQVED
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Known secondary structure (DSSP)



B

B









S
SS



BSS
SS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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