PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7k75M_

Fold library id	PDB Header	Molecule	Title
c7k75M_	2.50	PDB header: immune system	Chain: M: PDB Molecule: heavy chain of mad2-6 iga fab;

Links to external resources
Added to library: Sat Jun 26 11:08:59 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L Q L Q E S G P G L V K P S E T L S L T C S V S G E S I S N S A Y Y W A W I R Q P P G K A L E W I A T V Y Y T G R T Y H N P S L K S R V A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
S S
T T
T T
T T S
T T S
T T T T T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S M D T S K N Q F S L K L R S V T A A D T A V Y Y C A R T G I V V T T P D W F D P W G P G A L V T V S A A S P T S P K V F P L S L C Q P D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
G G G
S S S S S
S B
S S
B
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N V V I A C L V Q G F F P Q E P L S V T W S E S G Q G V T A R N F P P S Q D A S G D L Y T T S S Q L T L P A T Q C L A G K S V T C H V K H Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S S
S S
S T T
S S S S
G G G S
T T
T

. . . . . . . . . 220 . .

Sequence T N P S Q D V T V P C P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Q	L	Q	E	S	G	P	G	L	V	K	P	S	E	T	L	S	L	T	C	S	V	S	G	E	S	I	S	N	S	A	Y	Y	W	A	W	I	R	Q	P	P	G	K	A	L	E	W	I	A	T	V	Y	Y	T	G	R	T	Y	H	N	P	S	L	K	S	R	V	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S				T	T	S										S	S		T	T		T	T										T	T	S										T	T	S						T	T	T	T	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	M	D	T	S	K	N	Q	F	S	L	K	L	R	S	V	T	A	A	D	T	A	V	Y	Y	C	A	R	T	G	I	V	V	T	T	P	D	W	F	D	P	W	G	P	G	A	L	V	T	V	S	A	A	S	P	T	S	P	K	V	F	P	L	S	L	C	Q	P	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T								S			G	G	G											S	S	S	S	S						S	B										S	S			B													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	V	V	I	A	C	L	V	Q	G	F	F	P	Q	E	P	L	S	V	T	W	S	E	S	G	Q	G	V	T	A	R	N	F	P	P	S	Q	D	A	S	G	D	L	Y	T	T	S	S	Q	L	T	L	P	A	T	Q	C	L	A	G	K	S	V	T	C	H	V	K	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												B	S	S		S						S			S	T	T												S	S	S	S												G	G	G	S		T	T										T
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	T	N	P	S	Q	D	V	T	V	P	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S