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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7k1wF_

Fold library idPDB HeaderMoleculeTitle
c7k1wF_5.10PDB header: lipid binding proteinChain: F: PDB Molecule: fig4 sac homology model;


Added to library: Sat Oct 24 08:40:30 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKLVLYETRARYFLVGSNNAETKYRVLKIDRTEPKDLVIIDDRHSGLFRAVSAFGVVGFVRFLEGYYIVL
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Known secondary structure (DSSP)


SSSS

SS



SS



S


SSS

STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ITKRRKMADIGGHAIYKVEDTNMIYIPNDSVRVTHPDEARYLRIFQNVDLSSNFYFSYSYDLSHSLQYNL
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Known secondary structure (DSSP) TTTTSS
TTT





SSS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVLRMGICSEPYMKYVWNGELLDIIKSTVHRDWLLYIIHGFCGQSKLLIYGRPVYVTLIARRSSKFAGTR
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Known secondary structure (DSSP)
S


TTSS
TTT
TTTTTT

GGG




SSTT




SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLKRGANCEGDVANEVETEQILCDASVMSFTAGSYSSYVQVRGSVPLYWSQDISTMMPKPPITLDQADPF
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Known secondary structure (DSSP)

SSSB
TTS

S

SSSS





BS




SSSS






SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AHVAALHFDQMFQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDMAKYTK
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Known secondary structure (DSSP)
S




SSS






SSSS
S


SSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SKLCNVLDRLNVIAESVVKKTGFFVNRPDSGGCVIPTGRLQTGILRTNCVDCLDRTNTAQFMVGKCALAY
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Known secondary structure (DSSP) T

SS
S
TTS




SSS
 .........430.........440.........450.........460..
Sequence QLYSLGLIDKPNLQFDTDAVRLFEELYEDHGDTLSLQYGGSQ
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Known secondary structure (DSSP) TSS
SS
GGG
GGG





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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