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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7jpjB_

Fold library idPDB HeaderMoleculeTitle
c7jpjB_2.78PDB header: lyaseChain: B: PDB Molecule: diaminopimelate decarboxylase;


Added to library: Sat Jun 19 08:28:36 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TNPLQSIFLTPETAKACIDAAGGTPLYAYSIDKLEEAADACLAFPNAYGLTVRYAMKACPNASILKYFHS
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Known secondary structure (DSSP)


SS
SS

TSSST


SS
GGG


 .........80.........90.........100.........110.........120.........130.........140
Sequence KNIHVDASSGFEVRRAMDAGVPAENISLSTQELPEDFAALVDMGVKLNACSVSQLERFGEHYAGKGAKVG
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Known secondary structure (DSSP) TT
SSTT

GGG

SS

TTT

SSTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VRVNPGVGSGGSKTNVGGPSSSFGIWHELVTDGTVPDIVERYGLEVERIHTHIGSGSDPEIWQQVATKSL
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Known secondary structure (DSSP)
S

S





SSSTT

SSTSTT





SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SFCKVFPTVKTMNLGGGYKVGRNKGEVTTDLQKIGKPVADAFKKFAEKEGRELQMEIEPGTYLVAMAGAL
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Known secondary structure (DSSP) TT
TT










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SSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VSKVQDKVHTTGENSHTFLKLDAGMTDVLRPSLYGAVHPITILPGSGNSADVGDETESVVVVGHCCESGD
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Known secondary structure (DSSP)

STT

S

TTT







TT

GGG

S

SSS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LMTPAPGEPEQLAEQELRAAAVGDILVMDGSGAYCSGMSTKNYNSFPEAPEVLVDKAGKAHLIRKRQTLS
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Known secondary structure (DSSP) BSSTT




TT

S
TTTTTTS

TTGGG





TTS




 .........
Sequence QIYENEISV
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Known secondary structure (DSSP) TTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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