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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7jnoA_

Fold library idPDB HeaderMoleculeTitle
c7jnoA_1.95PDB header: viral protein, hydrolaseChain: A: PDB Molecule: serine protease ns3;


Added to library: Sat Aug 22 08:58:22 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HGWTSKGQITVLDMHPGSGKTHRVLPELIRQCIDRRLRTLVLAPTRVVLKEMERALNGKRVRFHSGAIVD
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Known secondary structure (DSSP)

TTSTT



TTS
TTTTTT

SSTTTS





 .........80.........90.........100.........110.........120.........130.........140
Sequence VMCHATYVNRRLLPQGRQNWEVAIMDEAHWTDPHSIAARGHLYTLAKENKCALVLMTATPPGKSEPFPES
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Known secondary structure (DSSP) TSTT




SSTT

STTS

SS
SS


SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence NGAITSEERQIPNGEWRDGFDWITEYEGRTAWFVPSIAKGGAIARTLRQKGKSVICLNSKTFEKDYSRVR
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Known secondary structure (DSSP) SS



SS


SS


S

SSTT

STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DEKPDFVVTTDISEMGANLDVSRVIDGRTNIKPEEVDGKVELTGTRRVTTASAAQRRGRVGRQDGRTDEY
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Known secondary structure (DSSP)

S
GGGGSS




S



TT

S

TTS

STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IYSGQCDDDDSGLVQWKEAQILLDNITTLRGPVATFYGPEQDKMPEVAGHFRLTEEKRKHFRHLLTHCDF
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Known secondary structure (DSSP)
S





TTSTSS
SSS




SGGGGGG

S
TTTT


S

 .........360.........370.........380.........390.........400.........410.........420
Sequence TPWLAWHVAANVSSVTDRSWTWEGPEANAVDEASGGLVTFRSPNGAERTLRPVWKDARMFKEGRDIKEFV
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Known secondary structure (DSSP)

S
TT

GGGTSS
GGG

B
TTSSB

TT




SS
BGGGGSTT

 .......
Sequence AYASGRR
Predicted secondary structure


SS confidence






Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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