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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7jmnE_

Fold library idPDB HeaderMoleculeTitle
c7jmnE_3.58PDB header: transcriptionChain: E: PDB Molecule: mediator of rna polymerase ii transcription subunit 5;


Added to library: Sat Mar 6 08:31:48 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPTPSNRECVDQRTLQYLQVLQKQGRIFVLFYFAFCENQIVNETLSQPVCKDICRKLLDSLDAFLPTLES
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Known secondary structure (DSSP)


BS

SSTTS






S

SS
SSTTTSS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FQVPELPVVNTRAGLYIYLGAALVGRPMIDDEALFSYLHNRYQGDLQAMAVHLILASFDLLANAVNEGAK
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Known secondary structure (DSSP) TTSS






SSSTSSS



ST

SS
S
TTSSSSTTTTT




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TGHLLKSFLINKVPLILVQLVAYAATTMYPFNAEMCITEALNQVNDSVRQDFCFACQLHGLLSQAAIETG
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Known secondary structure (DSSP)
TTTS
TT




GGGTGGGTTTSS
TTTS






TTTTSTTTT

SSTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence DITYQSLPPEGRYVKEQLVQACLQEPDRTLKLIGELDNMNGNVGAAAQAIVEICRDLASKPLSLDVLLLF
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Known secondary structure (DSSP)


TT


TTS

GGGTTTTTTS

SS


TTTTTTTTTTS
SSSSS
GGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DKPHKILHPLCELLDNWYQPVYEEFGSVLLLLLAFVYRYNLSTADLGIGVDRCQPLEQLSEQEKSHLGGW
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Known secondary structure (DSSP) S
GGGTSTT

TT

S
SS



GGGGGG

S


SSSS
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IHGLFDTEAGGLGDELMSSCPPQDFYLLAPTLFHQIVNALSAGYLTDEMLKGGLEYLVDVLLLPALVPAL
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Known secondary structure (DSSP) T
STTSSSSSSS


SS



STTSTTTSTTTS
TT
SSSS
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence LYLSNLLWADNQPIQNAVIKILQPILKPTSISNEASTMLSSVLNIVAKPLEHALKSYQRQDPECQKIEPL
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Known secondary structure (DSSP) TTSSSSS

SS

S

S
S

SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LLAIADNLAVSRRTGGADHTELESWCSAQITNMNGMPAPYTHRQTLAAQQILGPHRLLGIILDELKSSPE
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Known secondary structure (DSSP) TTTTTT




S



TTS



B



S





TTTS

S
 .........570.........580....
Sequence PGIAYDVVTTMICAPDVRNSTISS
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Known secondary structure (DSSP) TTTTTSS

STT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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