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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7jl3E_

Fold library idPDB HeaderMoleculeTitle
c7jl3E_4.20PDB header: hydrolase/transferase/rnaChain: E: PDB Molecule: antiviral innate immune response receptor rig-i;


Added to library: Mon Jan 4 15:53:03 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS
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T



TTS
TS
TT





SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTS
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Known secondary structure (DSSP) TTTTT



SS
SS



S

TSS

GGG
STTGGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KQHPYNMIMFNYLDQKLGGGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELE
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Known secondary structure (DSSP) TT






S



TT
SSTT




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKAC
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Known secondary structure (DSSP) S






S

SS

STTS


S

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence MVFQMPKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVEIEQDLTQRFEEKLQEL
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Known secondary structure (DSSP) TT




S


 .........360.........370.........380.........390.........400.........410.........420
Sequence ESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGGM
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Known secondary structure (DSSP) T
GGG


SS


S
T
SS

S







 .........430.........440.........450.........460.........470.........480.........490
Sequence TLPAQKCILDAFKGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNA
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T





GGG
S



S


S


STT

STT
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence GVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKENKKLLCRKCKALACYTAD
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Known secondary structure (DSSP) TS
TTT




TTT

GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence VRVIEECHYTVLGDAFKECFVSRPHPKPKKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA
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Known secondary structure (DSSP) TTT
S
SS
TT



BSSTT





SS

GGG
SS
 .........640.........650
Sequence TGVQTLYSKWKDFHFEKIPF
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Known secondary structure (DSSP) S



SSTTT

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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