PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7fcqL_

Fold library id	PDB Header	Molecule	Title
c7fcqL_	1.89	PDB header: antiviral protein	Chain: L: PDB Molecule: p14-44 antibody fab fragment light chain;

Links to external resources
Added to library: Tue Jun 21 21:29:31 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q S V L T Q P A S V S G S P G Q S I T I S C T G T S S D V G G Y N F V S W Y Q Q H P G K A P K L M I Y E V S D R P S G V S S R F S G S K S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B B
S
T T
T T T T T T
S
T T S
B T T T B
T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N T A S L T I S G L Q A E D E A D Y Y C F S Y T T S T T W V F G G G T K L T V L G Q P K A A P S V T L F P P S S E E L Q A N K A T L V C L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
G G G
T T S
B
S
B
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S D F Y P G A V T V A W K A D S S P V K A G V E T T T P S K Q S N N K Y A A S S Y L S L T P E Q W K S H R S Y S C Q V T H E G S T V E K T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S S
T T
T T
T T S
S S
T T

. . .

Sequence A P T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	S	V	L	T	Q	P	A	S	V	S	G	S	P	G	Q	S	I	T	I	S	C	T	G	T	S	S	D	V	G	G	Y	N	F	V	S	W	Y	Q	Q	H	P	G	K	A	P	K	L	M	I	Y	E	V	S	D	R	P	S	G	V	S	S	R	F	S	G	S	K	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B	B			S						T	T											T	T	T	T	T	T		S									T	T	S							B	T	T	T	B			T	T			T	T							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	T	A	S	L	T	I	S	G	L	Q	A	E	D	E	A	D	Y	Y	C	F	S	Y	T	T	S	T	T	W	V	F	G	G	G	T	K	L	T	V	L	G	Q	P	K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S			G	G	G											T	T	S					B									S				B																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	S	S	P	V	K	A	G	V	E	T	T	T	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S	H	R	S	Y	S	C	Q	V	T	H	E	G	S	T	V	E	K	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B	S	S									T	T					T	T										T	T	S																		S	S									T	T
	.	.	.
Sequence	A	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)