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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7fasA_

Fold library idPDB HeaderMoleculeTitle
c7fasA_3.60PDB header: cell adhesionChain: A: PDB Molecule: erythrocyte membrane protein 1, pfemp1;


Added to library: Sat Nov 20 10:26:36 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GYYRKNIKITVNHDSGTNDPCDRPPPYGCAIILSENVFVPPRRQRCINNLEKLNVDKIRDKHAFLADVLL
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Known secondary structure (DSSP)








S





SSS
S
















SS
S




TTTTT


S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TARNEGERIVQNHPDTNSSNVCNALERSFADIADIIRGTDLWKGNSNLEQNLKQMFAKIRRKLREDWWNA
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Known secondary structure (DSSP)


S
TSS





S



 .........150.........160.........170.........180.........190.........200.........210
Sequence NRQKVWEVITCGARSNDLLIKRGCRKCGHYEEKVTKLDYVPQFLRWLTEWIEDFYREKQNLIDDMERHRE
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Known secondary structure (DSSP) GGGS
TT
B





BTTTTSSS






S
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ECTCSTCKDKCKKYCECVKKWKSEWNQKNKCNCNESGIASVEQEQIKNNKNWIWKKSSGKEGGQKEYANT
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Known secondary structure (DSSP)



GGG


SSSS




B









B
SS

SSS



TTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IGLPPRTQSLCVVCLDKGKKTQELKNIRTNSELLKEWIIAAFHEGKNLKPDDNGKKLCKALEYSFADYGD
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Known secondary structure (DSSP) S
B
TTTT




TT




S

SS


ST


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence LIKGTSIWDNEYTKDLELNLQKIFGKLFRKYIEQDTSYLDELRESWWNTNKKYIWLAMKHGAGMNSTTCS
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Known secondary structure (DSSP) TT





SS

TT


SS


STT

SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence SCDDIPTIDLIPQYLRFLQEWVEHFCKQRQEKVKPVIENCKSCKECKTECKNKCEVYKKFIEDCKGGDGT
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Known secondary structure (DSSP)
TT
S
SGGGS
TTS
TT


SSSSS
TT

SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence AGSSWVKRWDQIYKRYSKYIEDAKRNRKAGTKNCGNKCVQSDIDSFFKHLIDIGLTTPSSYLSIVLDDNI
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Known secondary structure (DSSP) SSS


S

S






B
SST

SS
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence CGADKAPWTTYTTYTTTEKCNTAVVVNVPSPLGNTPHGYKYACQCKIPTNEETCDDRKEYMNQWSCGSDN
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Known secondary structure (DSSP) S
SS


SSS

S





GGGSSS
TT
TTTSSS



TTT
S









 .........640.........650.........660.........670.........680.........690.........700
Sequence YELCKYNGVDVKLDDKDVTFFNLFEQWNKEIQYQIEQYMTNNCKEKCKCYSLWIEKINDQWDKQKDNYNK
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Known secondary structure (DSSP)





SSS






 .........710.........720.........730.........740.........750.........760.........770
Sequence FQRKQIKVVSLSNFLFFSCWEEYIQYFNGDTFEFLIKKCGNDETIFSEKLNNAEKKCKENESTKIKNAIQ
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S





 .........780.........790.........800.........810.........820.........830.........840
Sequence KETELLYEYHPKGFCHAVQRSFIDYKNMILGNAWWKGIEGEMWDAVRCAITKINKKDEDQSVSWFKEWSE
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Known secondary structure (DSSP)





T


SSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence QFCIERLQYEKNIRDACTDKIQGDCKRKCEEYKKYISEKKQEWDKQKTKYENKYVGNKSLCHEGNDRTWS
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Known secondary structure (DSSP) SS





T
















 .........920.........930.........940.........950.........960.........970.........980
Sequence KKYIKKTLEGVYVPPRRQQLCLYELFPIIIKNNDITNAKKELLETLQIVAEREAYYLWKQYHAHNDTTYL
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Known secondary structure (DSSP)


B




S



T


TTT


TSS

S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence AHKKACCAIRGSFYDLEDIIKGNDLVHDEYTKYIDSKLNEIFDSSNKNDIETKRARTDWWENEAIDPKTI
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Known secondary structure (DSSP) TT


B
ST

S


S






 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence RQLVWDAMQSGVRKAIDEEKPNENFPPCMGVQHIGIAKPQFIRWLEEWTNEFCEKYTKYFEDMKSNCNLS
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Known secondary structure (DSSP) TT


S



TTTT








S


 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence NIECKKACANYTNWLNPKRIEWNGMSNYYNKIYRKSNKESEDGKDYSMIMEPTVIDYLNKCNGEINGNYI
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Known secondary structure (DSSP) TTTTTTTT

TTTSSTT



S


SST


S

BTTTB
 .........1200.........1210.........1220.........
Sequence CCSCKNIGEYSEHKMKCTEVYLEHVEEQLKEIDNAIKDY
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Known secondary structure (DSSP)





S



SSSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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