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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7f5bB_

Fold library idPDB HeaderMoleculeTitle
c7f5bB_3.90PDB header: membrane proteinChain: B: PDB Molecule: glutamate receptor ionotropic, kainate 2;


Added to library: Sat Oct 2 08:37:54 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG
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Known secondary structure (DSSP)

B


TTT

S

GGG
STT
S




SS

S



TTT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLA
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Known secondary structure (DSSP) TTTSSB
S




SB



S
B







S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW
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Known secondary structure (DSSP)
SS



SSTT
TTS





S
TTT

S



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMS
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Known secondary structure (DSSP)




S

STT
SSSB



TT
TT

STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITI
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Known secondary structure (DSSP) TTTTS

SSSSB
B

BTTTTSTTS





B
TT
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence AILQLQEEGKLHMMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNA
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Known secondary structure (DSSP) TT

S




STT





TS
 .........430...
Sequence QLEKRSFCSAMVE
Predicted secondary structure




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Known secondary structure (DSSP)
SS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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