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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7f59C_

Fold library idPDB HeaderMoleculeTitle
c7f59C_4.20PDB header: membrane proteinChain: C: PDB Molecule: glutamate receptor ionotropic, kainate 2;


Added to library: Sat Oct 2 09:10:44 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence THVLRFGGIFEYVESGPMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLG
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Known secondary structure (DSSP)
B







SSSS


TTS
TTB






SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence VAAILGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV
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Known secondary structure (DSSP)
S


SSTT



S




TT



SB


S

T
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVVYDDSTGLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQA
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Known secondary structure (DSSP) SSTTTGGGTS



SSTT
TT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLL
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Known secondary structure (DSSP) TT

STT


S

TTB

TTTTTS



B

B
S


STTS


TTS
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNG
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Known secondary structure (DSSP) SS


T
TT






TTS
S

ST

TT

BTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTTILEEPYVLFKKSDKP
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Known secondary structure (DSSP) B





B
TT




TTT






SSS
SS





S
S



BTTTB


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYV
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Known secondary structure (DSSP)

GGGSS




SS
SS


BTTTTB

TTS
SBB
S

B

 .........500.........510.........520.........530.........540.........550.........560
Sequence REKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFSPYEWYNP
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Known secondary structure (DSSP)


S








TTGGGTTS
TTSS
SS

B

 .........570.........580.........590.........600.........610.........620.........630
Sequence HPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVE
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Known secondary structure (DSSP)
TT
SS
S

B



TS

S



S
 .........640.........650.........660.........670.........680.........690.........700
Sequence RMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD
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Known secondary structure (DSSP) T




S
SSS


BSTTSST

STTTT

SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGN
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Known secondary structure (DSSP)


BTTSSSS

SS


SS
TTTTTTT
 .........780.........790.........800.........810.........820.........830.....
Sequence GCPEEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEELRM
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Known secondary structure (DSSP) SSS









S
TTSS


TSSS
SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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