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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7eyqA_

Fold library idPDB HeaderMoleculeTitle
c7eyqA_5.40PDB header: nuclear proteinChain: A: PDB Molecule: g protein/gfp fusion protein,nuclear pore complex protein


Added to library: Tue Jun 21 20:27:39 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LQEALENAGRLIDRQLQEDRMYPDLSELLMVSAPNNPTVSGMSDMDYPLQGPGLLSVPNLPEISSIRRVP
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Known secondary structure (DSSP)

S
S

TTTT

SGGGSB
STT






TTSS


SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQ
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Known secondary structure (DSSP)



S

TTTT
SS
TTTT






S

S



TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PHVRHLLVLATPVDIVILGLSYANLQSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLY
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Known secondary structure (DSSP) TT


SS








TT












SS


SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence EVAYQAEAGWFSQRCRKINHSKSFSEDDPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVS
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Known secondary structure (DSSP)
S


SSS
S

B





S




TTTT
TT




TTSSS



 .........290.........300.........310.........320.........330.........340.........350
Sequence QNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRPNTLTLVHVRLPP
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Known secondary structure (DSSP) TTS






TTT
SSTT








S






 .........360.........370.........380.........390.........400.........410.........420
Sequence GFSASSTVEKPSKVHRALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAI
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Known secondary structure (DSSP) SS
S

SS







SS




SS
SSSS




B
SSTTSSTT
B




SS





BS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DELKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGEEIE
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Known secondary structure (DSSP) TTSSS

S
SSSSSTTSS
TTTS



TT

TT


 .........500.........510.........520.........530.........540.........550.........560
Sequence RFFKLHQEDQACATCLILACSTAACDREVSAWATRAFFRYSGKHNGICIYFSRIMGNIWDVPCQLLESVL
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Known secondary structure (DSSP) TTTTT



TTT



 .........570.........580.........590.........600.........610.........620.........630
Sequence QELKGLQEFLDRNSQFAGGPLGKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKE
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Known secondary structure (DSSP) TTTTS
SS


TTTTT
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence LQEQLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQR
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Known secondary structure (DSSP)


STTTTTT



SSS
S


SS
SS

 .........710.........720.........730.........740.........750.........760.........770
Sequence SRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHG
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Known secondary structure (DSSP)

TTTS
TTTTTSS


SSTT
SSS
SS
TS
 .........780.........790.........800.........810.........820.........830...
Sequence EPAFQERLNSYKCITDTLQELVHFEQMLKLSQRSKDELFSIALYNWLIQVSPFLEPHLVRMAK
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Known secondary structure (DSSP)



TTT


STTT
SSGGGGT

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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