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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7etmD_

Fold library idPDB HeaderMoleculeTitle
c7etmD_5.90PDB header: viral proteinChain: D: PDB Molecule: portal protein;


Added to library: Sat Jul 17 08:31:42 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VIDIFPTGQTMSFLRLLHGFLGTCRGQSMHQVLRDPCVLRKQLLYGVCKTLFDTITVRRVAEEWKLHAAL
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Known secondary structure (DSSP)

TTSTTTTSS


TTGGGT
SSSTSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence FPYRALDEEDLEQYLLVWSASLRQSVQTGVLGALRDILYQYADNDDYGLYVDWCVTVGLVPLLDVKTKPS
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Known secondary structure (DSSP) S


S
TTTS
STTTTTTS
B




 .........150.........160.........170.........180.........190.........200.........210
Sequence EAAERAQFVRAAVQRATETHPLAQDLLQANLALLLQVAERLGAVRVANAPEVRVFKKVRSERLEAQLRGK
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Known secondary structure (DSSP) TTSSSTT
SSTTTTTTT
B



SSTTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence HIRLYVAAEPLAYERDKLLFTTPVAHLHEEILRYDGLCRHQKICQLLNTFPVKVVTASRHELNCKKLVEM
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Known secondary structure (DSSP)

SS

TTT

SSTT
SS





S

 .........290.........300.........310.........320.........330.........340.........350
Sequence MEQHDAKKSIMKFLLNQVIKCLEEQIQSQVDEIQDLRTLNQTWENRVRELRDLLTRYASRREDSMSLGAR
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Known secondary structure (DSSP)



S



 .........360.........370.........380.........390.........400.........410.........420
Sequence DAELYHLPVLEAVRKARDAAPFRPLAVEDNRLVANSFFSQFVPGTESLERFLTQLWENEYFRTFRLRRLV
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Known secondary structure (DSSP) S
S






SS












TTTTS

 .........430.........440.........450.........460.........470.........480.........490
Sequence THQGAEEAIVYSNYTVERVTLPYLCHILALGTLDPVPEAYLQLSFGEIVAAAYDDSKFCRYVELICSREK
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Known secondary structure (DSSP)
GGG


TTTTTTS

S





SS
TTSSS
 ........
Sequence ARRRQMSR
Predicted secondary structure

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Known secondary structure (DSSP) TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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