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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7er1B_

Fold library idPDB HeaderMoleculeTitle
c7er1B_2.20PDB header: viral proteinChain: B: PDB Molecule: capsid p domain;


Added to library: Tue Jun 21 19:47:55 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PFSVPNLPLNTLSNSRVPSLIRSMMVSRDHGQMVQFQNGRVTLDGQLQGTTPTSASQLCKIRGSVFHANG
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Known secondary structure (DSSP)





S
GGGSB
SSSSSB



TTTTT
B

SSS
B
TT

B
TT

SSGGGTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GNGYNLTELDGSPYHAFESPAPIGFPDLGECDWHMEASPTTQFDTGDVIKQINVKQEAAFAPHLGTIQAD
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Known secondary structure (DSSP)
TTS



TTT
SSSTT




SSS

SSGGG


STT
BGGGT
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLSDVSVNTNMIAKLGWVSPASDGHRGNVDPWVIPRYGSTLTEAAQLAPPIYPPGFGEAIVFFMSDFPIA
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Known secondary structure (DSSP) S
TTS
TT

TT
S
SSB
TT




S
SSS

TT



B


STT



BT
 .........220.........230.........240.........250.........260.........270.........280
Sequence HGANGLSVPCTIPQEFVTHFVNEQAPTRGEAALLHYLDPDTHRNLGEFKLYPEGFMTCVPNSSGTGPQTL
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Known secondary structure (DSSP) TBTTTTSS





SS
TTT


TTS

BSTTS
GGGGS
 .........290.........300...
Sequence PINGVFVFVSWVSRFYQLKPVGT
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Known secondary structure (DSSP)
SS

TT




B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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