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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ehpA_

Fold library idPDB HeaderMoleculeTitle
c7ehpA_2.01PDB header: sugar binding proteinChain: A: PDB Molecule: chitin oligosaccahride binding protein nagb1;


Added to library: Sat Jul 10 09:12:51 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVSLRHTQVRDDVRLRLKMLEDIAQRMEAAVPGLRVELEGVEDKVNRFEKLPAEMAAGNPPKIFDLFGGT
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Known secondary structure (DSSP)



SGGGSTT



TT


STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DTAKYVKAGRLLELTPILNELGLKDKFPNLQEFTVDGKIYGLPTAYFVEGVFYNKQIFKQLNVDVPRRWE
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Known secondary structure (DSSP) TT
B


T
GGG
S

GGGTT

ST




B
 .........150.........160.........170.........180.........190.........200.........210
Sequence DLMDVAAKAKASGFVPFAFASSDGWVANMMLNTLWVRTAGDDSVPGFVRGTRRWTDPDVADGFKRYDTLL
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Known secondary structure (DSSP) TT



SS
TTTSS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KKGYLQEGSLGQKYAEQQYAFREGRAAMMFDGSWASAALVDAGKTKIAEDIGFFSFPDVGGKGDGMINGG
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Known secondary structure (DSSP) T
B
TTGGG

TTSGGGGGGTSSGGG
TTSTT


B
SSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YSNGYGFSASLNEREKKAAVEFIKIMYSEEMQKRQLKESGILPAMKLSDLSGVHPVIREMIQASELRQFP
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Known secondary structure (DSSP)

BS


SS

SS

S





TTS
 .........360.........370.........380.........390.......
Sequence AFDSIVQAKVRETLEMCMQELIGGRMTVEQVLDKMQKVQEDANRDMK
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Known secondary structure (DSSP)
GGGTS
TTSS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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