Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7eg7A_

Fold library idPDB HeaderMoleculeTitle
c7eg7A_6.20PDB header: transcriptionChain: A: PDB Molecule: transcription initiation factor tfiid subunit 1;


Added to library: Sat May 8 09:02:35 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WRYGPARLWYDMLGVPEDDLLADENFLMVTQLHWEDDIIWDGEPWYSIFPIDNEDLVYGRWEDNIIWDAQ
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)
TTSTTT





SSGGGGSTTSSS
GGGGS
SS



S
SS



S
GGGGS
SS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence AMPRLLEPPVLTLDPNDENLILPWNLSNDEYYYPKIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKK
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP) TS











SSSTT








S






TT
TTTS
S


TTT





 .........150.........160.........170.........180.........190.........200.........210
Sequence YSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMM
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP)
SSSSSSS
S



STTSS





SGGGG
TTSS


SSSS
S


 .........220.........230.........240.........250.........260.........270.........280
Sequence QVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDF
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)
TT





SS







SSS

SS
SSSS


TT
SSS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKK
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
SS






S



TT
T

SSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence AFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAG
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
TTS
TT
SSTTTT
TT








 .........430.........440.........450.........460.........470.........480.........490
Sequence DDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKDADLRRLSLKNAKQLLRKFGVP
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
TSTS

SSSS

SSSSSSS







TTTTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence EEEIKKLSRWEVIDVVRTMSTERFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTVTSLNSSATGRCLK
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)




SSS











STTTT

 .........570.........580.........590.........
Sequence IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEF
Predicted secondary structure







SS confidence






































Known secondary structure (DSSP)





TTT










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D