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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7eaiB_

Fold library idPDB HeaderMoleculeTitle
c7eaiB_3.80PDB header: virusChain: B: PDB Molecule: capsid protein vp0;


Added to library: Sat Jul 17 08:31:07 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAQVSTQKTTIHYTNINYYKDAASNSANRQDFTSDRVRSITLGNSTITTQECANVVVGYGVWPSYLQDNE
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Known secondary structure (DSSP)



B






B




SS
GGGS














TT



SS


B
TTS






GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ATAEDQPTQPDVATCRFYTLDSIQWQKESDGWWWKFPEALKNMGLFGQNMEYHYLGRSGYTIHVQCNASK
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Known secondary structure (DSSP)


S





SSTT
S







TT




GGGTSSSSTTTTTBS






T
 .........150.........160.........170.........180.........190.........200.........210
Sequence FHQGCLLVVCVPEAEMGCSDVEREVVAASLSSEDTAKSFSRTESNGQHTVQTVVYNAGMGVGVGNLTIFP
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Known secondary structure (DSSP) T
B


S



BSSTT





SSS


SS



SSSB


TTTTTTSS
GGG

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HQWINLRTNNSATIVMPYINSVPMDNMFRHYNFTLMIIPFAKLEYTEQASNYVPITVTVAPMCAEYNGLR
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Known secondary structure (DSSP)

TTT
S





SSS


SSS



SS

B

SSS









B
 .....
Sequence LASHQ
Predicted secondary structure

SS confidence




Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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