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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7dvq9_

Fold library idPDB HeaderMoleculeTitle
c7dvq9_2.89PDB header: splicingChain: 9: PDB Molecule: ring-type e3 ubiquitin-protein ligase ppil2;


Added to library: Sat Apr 3 09:38:47 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKRQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCSLSLQPFVYPVCTPDGIVFDLLNIVPWLK
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Known secondary structure (DSSP)




SSS
SS

SS






SS





TTB
TTT
SB
SS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KYGTNPSNGEKLDGRSLIKLNFSKNSEGKYHCPVLFTVFTNNTHIVAVRTTGNVYAYEAVEQLNIKAKNF
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Known secondary structure (DSSP) SSB
TTSSSB

GGG

B

SSS

TTT

B

TTS
TTT
BTTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence RDLLTDEPFSRQDIITLQDPTNQDPSYYLKNTNAETRETLQELYKEFKGDEILAATMAHYSTGKVSASFT
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Known secondary structure (DSSP) B
SSS

B

GGG
S



TTSS

S





S


S

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence STAMVPETTHEALRYQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNF
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Known secondary structure (DSSP)
TTS



S









S
TT
TTTSTTTTTT

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFG
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Known secondary structure (DSSP)


TTSSSS



SSSS






TT

S
STT

SSTT


S

SS

GGGTTTS
 .........360.........370.........380.........390.........400.........
Sequence RVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVAP
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Known secondary structure (DSSP)
S
B
TTT

BSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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