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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7dl2A_

Fold library idPDB HeaderMoleculeTitle
c7dl2A_4.40PDB header: gene regulationChain: A: PDB Molecule: isoform 7 of tuberin;


Added to library: Mon Jan 4 13:38:52 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IKDYPSNEDLHERLEVFKALTDNGRHITYLEEELADFVLQWMDVGLSSEFLLVLVNLVKFNSCYLDEYIA
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Known secondary structure (DSSP)

SS





S


SSSSSS

ST



S

TT





STT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence RMVQMICLLCVRTASSVDIEVSLQVLDAVVCYNCLPAESLPLFIVTLCRTINVKELCEPCWKLMRNLLGT
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Known secondary structure (DSSP)

S
STTS

TTTGGGTTS




SSTTSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HLGHSAIYNMCHLMEDRAYMEDAPLLRGAVFFVGMALWGAHRLYSLRNSPTSVLPSFYQAMACPNEVVSY
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Known secondary structure (DSSP) TTT

TT
SS
TT
GGGSTT

SS

S


TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence EIVLSITRLIKKWDILLNIIERLLQQLQTLDSPELRTIVHDLLTTVEELCDQNEFHGSQERYFELVERCA
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Known secondary structure (DSSP) T



TTTS

SSGGGG



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence DQRPESSLLNLISYRAQSIHPAKDGWIQNLQALMERFFRSESRGAVRIKVLDVLSFVLLINRQFYEEELI
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Known secondary structure (DSSP) TTTTTS
SS
SS

TTS



TTT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence NSVVISQLSHIPEDKDHQVRKLATQLLVDLAEGCHTHHFNSLLDIIEKVMARSLSPPPELEERDVAAYSA
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Known secondary structure (DSSP) TTTTTTTT
SS

SSTT

S


GGGTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLEDVKTAVLGLLVILQTKLYTLPASHATRVYEMLVSHIQLHYKHSYTLPIASSIRLQAFDFLLLLRADS
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Known secondary structure (DSSP) TSSS
TT

ST
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LHRLGLPNKDGVVRFSPYSVPYSLLFRVLLQCLKQESDWKVLKLVLGRLPESLRYKVLIFTSPCSVDQLC
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Known secondary structure (DSSP) SSS


SSSS








S

SS
S


T
 .........570.........580.........590.........600.........610.........620.........630
Sequence SALCSMLSGPKTLERLSRTDLHLAVVPVLTALISYHNYLDKTKQREMVYCLEQGLIHRCASQCVVALSIC
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Known secondary structure (DSSP) SSTTTTS


TT
GGGS
TTSSSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence SVEMPDIIIKALPVLVVKLTHISATASMAVPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKF
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Known secondary structure (DSSP)
TT
S


STTT
TTTT
S

GGGG
SSSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence NQYIVCLAHHVIAMWFIRCRLPFRKDFVPFITKGLRSNVLLSFDDTPEKDSFRARLKNLHLELTETCLDM
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Known secondary structure (DSSP)
S
STT
TTTTSS
SS




STTT

 .........780.........790.........800.........810.........820.........830.........840
Sequence MARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLVTVTTSVGTGTRSLLGNLAAYVPLLTQGWAEIL
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Known secondary structure (DSSP) TT



SS



TTT

SSS


S



GGGST
 .........850.........860.........870.........880.........890.........900.........910
Sequence VRRPTGNTSWLMSLENPLSPFSSELSNALMAAERFKEHRGINPSFVFLQLYHSPFFGDESNKPILLPNES
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Known secondary structure (DSSP) TT


S


TTT




T

SS




TS

TT

SSSS



TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence QSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLTGLGRLIELKDCQPDKVYL
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Known secondary structure (DSSP) S
SS

SS
TT
SSTTTT

S

SSSB


SSSSS
TTS

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GGLDVQFTYCWHDDIMQAVFHIATLMPDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIVTPLDY
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Known secondary structure (DSSP)









SS
TT


S
S

SSS


GGG


SS


SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ECNLVSLQCRKDMEGLVDTSVAKIVSDRNLPFVARQMALHANMASQVHHSRSNPTDIYPSKWIARLRHIK
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Known secondary structure (DSSP) S


SSTTTTS
S


STTTTS



S
SS
 .......
Sequence RLRQRIC
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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