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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7degD_

Fold library idPDB HeaderMoleculeTitle
c7degD_3.40PDB header: oxidoreductaseChain: D: PDB Molecule: cytochrome c oxidase subunit i;


Added to library: Sat Aug 7 08:47:44 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSNAIKFIILTEIIFPTLLLVFGIYHGVMQVFYRSGIIKAESFLGIDYYQGLTLHGVINVIVYTTIFIVG
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Known secondary structure (DSSP)

SSTTTSS
TT
STT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FSNAIVAYSLKKPLREKVQWIALGMMVIGTLMAAWAMFTGRATVLYTFYPPLIAHWTFYLGAVLLVLGSL
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Known secondary structure (DSSP) TT



TTTSSSTT
S
TT

TTS


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VPFFFDWIPSAIQWKRENPDQKLPLAVFGTFVNFILWTIMIVPVAIEILFQLLPLSLGLVDEINPLLART
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Known secondary structure (DSSP) TSSTTTTS
S



TTTTTS




TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGKLYSDPAARLAFILFLIFSLPVGLHHQFTDPGITNTW
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Known secondary structure (DSSP) TTTTTTTTS
TT


S
SSSTTGGGS
SS
SSS
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KLIHALFTFGVALPSMITAFTVATSLEYSVKAEHPELKNSKFYWWTFLPFMRLEGNKWMFSYFFAGLVLF
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Known secondary structure (DSSP) TS
GGGTT
SSSTTSSS
TT

SSS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence FIGGITGIVNASYNVNLVVHNTAYVPGHFHTTVGGLVLLVFFALSLYMVSKLRGSEVKLKGLAVLAPYFW
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Known secondary structure (DSSP) STTTTTBTTTTTTTT



SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence MQGMFMFSYAMMVGGVVVGFPRRTNAGLTYLNPDSPLYRPEWTGYAQLAAVGGVLLAIGFAFYFASLIAT
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Known secondary structure (DSSP) SS

BSS


SSSTT
TTSS


GGGSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ALAPKVRESTLEFPIADAYHDAPAPLLNNLKTWTVAAIILAVLSYIPPLYDASVRGVFFKSPAYNEKFPM
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Known secondary structure (DSSP) S


S










SS



SSSS

TTTTTTTTTTTTSSS
SS





TTS

 .........570.........580.
Sequence GAEKKEEKKELSKAEGGITQK
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Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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