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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7dd9A_

Fold library idPDB HeaderMoleculeTitle
c7dd9A_2.40PDB header: hydrolaseChain: A: PDB Molecule: alpha-mannosidase,zz-type zinc finger-containing protein


Added to library: Sat Jul 17 08:42:39 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLFPVLNNTPVGKQVDSIYESRLDQFLSEGQYRDFNLPSVYDHARIDNPSGDVNNDLSKGFVDLKVYRVP
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Known secondary structure (DSSP)

S
S


S





GGGGSS

STTGGGSGGGGSSSS
B


GGG
SS
SSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLSRPSFNEVVGHKKFDETASKGDTFGPSWATFWFEVHIRLPKSWAKYEQVIFQWNCDNEGLVYSQDGVP
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Known secondary structure (DSSP) SS



STTTTTTS



TT

STT


GGGGS
S

SSB


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LQAFSGSERTDFILPDSWKTTEDTFYIEMACNGMFGTGAGSQIAPPDPNRYFTLTKADLVAPNLPAMALA
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Known secondary structure (DSSP)

BTTTB


SSSTTTT
SSBTTB

TTSTTS


TT




 .........220.........230.........240.........250.........260.........270.........280
Sequence YDFLLMQQCVKQLPSNCWQKYKARQICNDIMNTFHPNDLSTINECRNLAKAFLGNDIDSEAVFEKNNDKA
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Known secondary structure (DSSP) S
TT

BTTBT
S
TTSGGGGGSSTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NVFAIGHCHIDTAWLWPFAETRRKIVRSWATQMNIMDRYPEYQFVCSQALQYLWLKEDHPDVFEKLKEYV
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Known secondary structure (DSSP) S



SSSSS

TT




 .........360.........370.........380.........390.........400.........410.........420
Sequence NQNKFIPIGGSWVEHDTNIPNGESLIRQFLLGQHFFEKEFGVRCRTFWLPDTFGYSSQIPQICRLCGMDR
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Known secondary structure (DSSP) TT
S
S
SSS
B
SSSS
SS




TT
S
B
TTTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence FLTQKLSWNNINSFPTSTFNWVALDGSQVICHMPPANTYTADTNVNDVLHSIDQHKNLVNDQAGLLVFGI
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Known secondary structure (DSSP)

GGGG
SS


S
S
TTS


SSS
SSB


T
TTTTT


S
 .........500.........510.........520.........530.........540.........550.........560
Sequence GDGGGGPTPEMLEKLRRCKGIANTVGYLPNVKLGNTVDEFFDGILKRTNAGQTLPSWNGELYFEFHRGTY
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Known secondary structure (DSSP)
SSS



T

S


S

TTTTTTS
S
B

SS
GGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence TTQAELKKLMRKVEIALHDAEYVSTLASIFSKDYSYPKESLQDLWRDTLLCQFHDVLPGSCIEMVYKDAI
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Known secondary structure (DSSP) TSS
TT



TTBTTTTTT
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence PIMSKVLKNTEALLWQAIEQLGFKKASSSDNKEQLCLLNTLPWNVRGVITETEENKLVYFESCDGKGILT
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Known secondary structure (DSSP) T
TTTS
GGG

SSS


SSSS

SS
SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence AAHTSLKHPAAAYQKDDNFILVNDHLRVTIAPNGLILSLFDLHKEREILDLKSGKNHAGANQYVLFEDTP
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Known secondary structure (DSSP)

S

SB


SS

SS
TTS
TTTT



SSSS

S
BS


 .........780.........790.........800.........810.........820.........830.........840
Sequence LSWQAWDTEVFSLEKYEVLDKGKVSIKESGPLRASVVVDIPISELSHMKATISLEGYNDCSEFTGVNFTC
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Known secondary structure (DSSP) SS
TTT


GGGGGS



SSTT
BSSGGG


 .........850.........860.........870.........880.........890.........900.........910
Sequence EVDWHESCKFLKVEFPVDIHSEFASYETQFGITKRPTHYNTSWDVAKFEVCHQKFADYSDFTYGVSVLND
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Known secondary structure (DSSP)

SS




STTSS

STSS
SS
SS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence CKYGFSTHGNLMRLSLLRSPKQPDAHADMGKHTIRYAVYPHSKPLDSSTVRAAHKFNSNFRLLTRASDTA
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Known secondary structure (DSSP) S

TT


SS
TTSS
SSSS
T


S
SSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence NLDIFDAFQLVGEPNVILSHIKMAEKGKSIILRVYESLGGKSRARLVIKSLTVASVTKCNGLEEDLEELC
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Known secondary structure (DSSP)



TTS
TT
SSSS
SSSS

SS

TT


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence TLKSNDYYEVPIELRAFEIATFKVNLGFKSVACNTCLKIIRNDSFHCTKCFDFDVCRDCYAKQAFLHPCP
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Known secondary structure (DSSP)



SS



TT
S



B
SSS

B

S
TTSSS
TT


SS
S
 .........
Sequence KPHFVLVRS
Predicted secondary structure


SS confidence








Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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