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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7d9jB_

Fold library idPDB HeaderMoleculeTitle
c7d9jB_2.19PDB header: oxidoreductaseChain: B: PDB Molecule: spermidine dehydrogenase, spdh;


Added to library: Sat Nov 20 08:38:27 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YYPPALTGLRGSHPGAFEVAHQMGWEKKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARILV
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Known secondary structure (DSSP)

GGG

S
TTSSTT





TTS





BSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence IENHDDFGGHAKRNEFQAGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLG
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Known secondary structure (DSSP)
SSSSSBTT

TTSS




S

TT

GGGB
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSRAVFFDKASFGVDKLVSGDPTPMVADEVPRDRLNARSWRAFIGDFPLSREDREALIALYESPRDYLAG
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Known secondary structure (DSSP)

SS






SS
SS
GGG




TSSS
S


TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KSVEEKETYLAKTSYRDYLLKNVGLSETSVKYFQGRSNDFSALGADALPAADAYAAGFPGFDALGLPQPS
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Known secondary structure (DSSP) S
SBTT


TTTTTTSS
GGGSBTT
SS
TTS





 .........290.........300.........310.........320.........330.........340.........350
Sequence EEAQAEMDEPYIYHFPDGNASLARLMVRDLIPAVAPGRGMEDIVMARFDYSKLDLAGHPVRLRLNSTAVS
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Known secondary structure (DSSP) S





TTTTSGGG



STTTTTT



GGGTT
TTSS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence VRNRAGGVDVGYSRAGRLHRVRGKHCVMACYNMMVPYLLRDLSEEQAHALSQNVKFPLVATKVLLRNWQA
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Known secondary structure (DSSP) TTTT
S
GGGBTT

T




S

 .........430.........440.........450.........460.........470.........480.........490
Sequence WKTLGIHEIYAPTLPYSRIKLDFPVDLGSYRHPRDPRQPIGVHMVYVPTTPNAGMDARTQARVGRSKLYA
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Known secondary structure (DSSP) T
SSSS


B
BTTB




TTS




TTSS

T
 .........500.........510.........520.........530.........540.........550.........560
Sequence MSFEQLEKDIRDQLQAMLGPAGFDHRRDITGITVNRWSHGYSYFMNTLYDDEAESEALMELARSKVGNVA
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Known secondary structure (DSSP)

GGGT

SS
S




TTT

T

BTT
 .........570.........580.......
Sequence IANSDAAWDAYAHAAIDQAVRAVRELG
Predicted secondary structure








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Known secondary structure (DSSP)
SGGGGT


TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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