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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7d6nF_

Fold library idPDB HeaderMoleculeTitle
c7d6nF_3.17PDB header: transferaseChain: F: PDB Molecule: tick-borne encephalitis virus rna-dependent rna polymerase;


Added to library: Mon Jan 4 13:05:36 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KVKEKDVQERISALREQYGETWHMDREHPYRTWQYWGSYRTAPTGSAASLINGVVKLLSWPWNAREDVVR
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Known secondary structure (DSSP)

S


S

S
TTT
B

TT


SSS





S


B


GGGS
STTTG
 .........80.........90.........100.........110.........120.........130.........140
Sequence MAMTDTTAFGQQRVFKEKVDTKAQEPQPGTKVIMRAVNDWILERLARKSKPRMCSREEFIAKVKSQNSAK
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Known secondary structure (DSSP) GG



STS






S










 .........150.........160.........170.........180.........190.........200.........210
Sequence EAVEDPAFWQLVDEERERHLAGRCAHCVYNMMWYMWLGSRFLEFEALGFLNEDHWASRGSSGSGVEGISL
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Known secondary structure (DSSP) TTST

SS

B






TTTTTTSSSB
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence NYLGWYLKGLSTLEGGLFYADDTAGWDTKVTNADLEDEEQLLRYMEGEHKQLAATIMQKAYHAKVVKVAR
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Known secondary structure (DSSP) TTSSSS
BB


BTTGGGG

GGGGG

STTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PSRDGGCVMDVITRRDQRGSGQVVTYALNTLTNIKVQLIRMMEGEGVIEASDAHNPRLLRVERWLRDHGE
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Known secondary structure (DSSP)
TTSSSSS

TTSTTTS

GGGGTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence ERLGRMLVSGDDCVVRPVDDRFSRALYFLNDMAKTRKDIGEWEHSVGFSNWEEVPFCSHHFHELVMKDGR
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Known secondary structure (DSSP) TTTT

SSGGGGT

TTTTTTT

BTTS
TTS



BS
GGG

BTTB
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence ALIVPCRDQDELVGRARVSPGCGWSVRETACLSKAYGQMWLLSYFHRRDLRTLGLAICSAVPIDWVPTGR
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Known secondary structure (DSSP)

TB
S
SS

STTSS
SS



S
 .........500.........510.........520.........530.........540.........550.........560
Sequence TTWSIHASGAWMTTEDMLDVWNRVWILDNPFMHSKEKIVEWRDVPYLPKSHDMLCSLVRKERAEWAKNIW
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Known secondary structure (DSSP) S


TT


TTSSSS
TTS
TT
S






GGGS



TT




T
 .........570.........580...
Sequence GAVEKVRKMIGQEKFKDYLSCMD
Predicted secondary structure





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Known secondary structure (DSSP)
SS




TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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