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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7d6eE_

Fold library idPDB HeaderMoleculeTitle
c7d6eE_10.00PDB header: protein transportChain: E: PDB Molecule: sorting nexin-1;


Added to library: Sat Mar 20 08:53:26 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPP
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Known secondary structure (DSSP)




SSSSS




STTSSSS
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S

 .........80.........90.........100.........110.........120.........130.........140
Sequence EKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQALSGA
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Known secondary structure (DSSP)

SS
SSSSSS


STTTTTS

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T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTALFAKSLA
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Known secondary structure (DSSP) TSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQD
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Known secondary structure (DSSP) TSS


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence AQATLQKKRESEARLLWANKPDKLQQAKDEITEWESRVTQYERDFERISTVVRKEVTRFEKEKSKDFKNH
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Known secondary structure (DSSP) TTTTSS
 .........360.........370.........380
Sequence VMKYLETLLHSQQQLAKYWEAFLPEAKAIS
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Known secondary structure (DSSP) TTTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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