PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7d30A_

Fold library id	PDB Header	Molecule	Title
c7d30A_	2.10	PDB header: protein binding	Chain: A: PDB Molecule: sybody fusion of mr17-sr31 with a gs linker;

Links to external resources
Added to library: Sat Feb 20 08:43:24 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q V Q L V E S G G G L V Q A G G S L R L S C A A S G F P V E V W R M E W Y R Q A P G K E R E G V A A I E S Y G H G T R Y A D S V K G R F T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T S S
T T S
S T T S
G G G T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S R D N A K N T V Y L Q M N S L K P E D T A V Y Y C N V K D D G Q L A Y H Y D Q G T Q V T V S S S Q V Q L V E S G G G L V Q A G G S L R L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
G G G
T T
S T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C A A S G F P V W Q G E M A W Y R Q A P G K E R E W V A A I S S M G Y K T Y Y A D S V K G R F T I S R D N A K N T V Y L Q M N S L K P E D T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G S
T T S
T T S
G G G T T T T T T T
S
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . .

Sequence A V Y Y C A V M V G F W Y A G Q G T Q V T V S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	V	Q	L	V	E	S	G	G	G	L	V	Q	A	G	G	S	L	R	L	S	C	A	A	S	G	F	P	V	E	V	W	R	M	E	W	Y	R	Q	A	P	G	K	E	R	E	G	V	A	A	I	E	S	Y	G	H	G	T	R	Y	A	D	S	V	K	G	R	F	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T											S	S		T	T	S	S									T	T	S										S	T	T	S						G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	R	D	N	A	K	N	T	V	Y	L	Q	M	N	S	L	K	P	E	D	T	A	V	Y	Y	C	N	V	K	D	D	G	Q	L	A	Y	H	Y	D	Q	G	T	Q	V	T	V	S	S	S	Q	V	Q	L	V	E	S	G	G	G	L	V	Q	A	G	G	S	L	R	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T								S			G	G	G											T	T		S	T	T																											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	A	A	S	G	F	P	V	W	Q	G	E	M	A	W	Y	R	Q	A	P	G	K	E	R	E	W	V	A	A	I	S	S	M	G	Y	K	T	Y	Y	A	D	S	V	K	G	R	F	T	I	S	R	D	N	A	K	N	T	V	Y	L	Q	M	N	S	L	K	P	E	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		G	G	G	S									T	T	S										T	T	S							G	G	G	T	T	T							T	T	T	T								S			G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Sequence	A	V	Y	Y	C	A	V	M	V	G	F	W	Y	A	G	Q	G	T	Q	V	T	V	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S