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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cunE_

Fold library idPDB HeaderMoleculeTitle
c7cunE_3.50PDB header: transcriptionChain: E: PDB Molecule: integrator complex subunit 5;


Added to library: Sat Nov 28 09:29:10 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RATRTLMDIYVQCLSALIGSCPDACVDALLDTSVQHSPHFDWVVAHIGSSFPGTIISRVLSCGLKDFCVH
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Known secondary structure (DSSP)
TTS

SSSST
SSSSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GGAGGGAGSSGGSSSQTPSTDPFPGSPAIPAEKRVPKIASVVGILGHLASRHGDSIRRELLRMFHDSLAG
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Known secondary structure (DSSP) TS

T

SSSSGGG



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GSGGRSGDPSLQATVPFLLQLAVMSPALLGTVSGELVDCLKPPAVLSQLQQHLQGFPREELDNMLNLAVH
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Known secondary structure (DSSP) TT

SS
TTT
SSSTT
S

TTSSSSSSSG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LVSQASGAGAYRLLQFLVDTAMPASVITTQGLAVPDTVREACDRLIQLLLLHLQKLVHHRGGSPGEGVLG
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Known secondary structure (DSSP) GGS
TTT

SSSTS


SSSSTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PPPPPRLVPFLDALKNHVGELCGETLRLERKRFLWQHQLLGLLSVYTRPSCGPEALGHLLSRARSPEELS
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Known secondary structure (DSSP) SSS




GGGTT

SSSSSTTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LATQLYAGLVVSLSGLLPLAFRSCLARVHAGTLQPPFTARFLRNLALLVGWEQQGGEGPAALGAHFGESA
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Known secondary structure (DSSP) TTT



SS
S
S
SSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence SAHLSDLAPLLLHPEEEVAEAAASLLAICPFPSEALSPSQLLGLVRAGVHRFFASLRLHGPPGVASACQL
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Known secondary structure (DSSP) GGGSGGGG
SSTT



SS


T
GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence LTRLSQTSPAGLKAVLQLLVEGALHRGNTELFGGQTNRRHTAAVPGPGGIWSVFHAGVIGRGLKPPKFVQ
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Known secondary structure (DSSP) TS
TTSSSS
TTTT



T
STTTSSS

SS


SS

S
S




 .........570.........580.........590.........600.........610.........620.........630
Sequence SRNQQEVIYNTQSLLSLLVHCCSAPGGTECGECWGAPILSPEAAKAVAVTLVESVCPDAAGAELAWPPEE
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Known secondary structure (DSSP)
S
STTSB



S

SSS




B




SS

SS


SG
 .........640.........650.........660.........670.........680.........690.........700
Sequence HARATVERDLRIGRRFREQPLLFELLKLVAAAPPALCYCSVLLRGLLAALLGHWEASRHPDTTHSPWHLE
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Known secondary structure (DSSP) GGGT

TTTSGGGTTT
T


SSGGGS
 .........710.........720.........730.........740.........750.........760.........770
Sequence ASCTLVAVMAEGSLLPPALGNMHEVFSQLAPFEVRLLLLSVWGFLREHGPLPQKFIFQSERGRFIRDFSE
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Known secondary structure (DSSP) TTTS
GGG

S


SSS

B
SSSS
B





 .........780.........790......
Sequence GGPHLAVLHSVLHRNIDRLGLFSGRF
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Known secondary structure (DSSP)
TSTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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