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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cunD_

Fold library idPDB HeaderMoleculeTitle
c7cunD_3.50PDB header: transcriptionChain: D: PDB Molecule: integrator complex subunit 4;


Added to library: Sat Nov 28 08:48:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSKSAALHIDLCKATSPADALQYLLQFARKPVEAESVEGVVRILLEHYYKENDPSVRLKIASLLGLLSKT
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Known secondary structure (DSSP)
S

SSSS



SSTTTSSS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGFSPDCIMDDAINILQNEKSHQVLAQLLDTLLAIGTKLPENQAIQMRLVDVACKHLTDTSHGVRNKCLQ
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Known secondary structure (DSSP) T


TT

SSTTTT
SSSSSSST


SSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLGNLGSLEKVQKIIGDYFSDQDPRVRTAAIKAMLQLHERGLKLHQTIYNQACKLLSDDYEQVRSAAVQL
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Known secondary structure (DSSP)







TT
S
TT




STTTS

SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IWVVSQLYPESIMVSDGSWVVRVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSGAC
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Known secondary structure (DSSP)
S




SSSST
GGG
SSTTTTS


TGGGSSS





 .........290.........300.........310.........320.........330.........340.........350
Sequence GAFVHGLEDEMYEVRIAAVEALCMLAQSSPSFAEKCLDFLVDMFNDEIEEVRLQSIHTMRKISNNITLRE
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Known secondary structure (DSSP)
SSSSSSSSS
SSSSSTTTTT




TT
SS


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DQLDTVLAVLEDSSRDIREALHELLCCTNVSTKEGIHLALVELLKNLTKYPTDRDSIWKCLKFLGSRHPT
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Known secondary structure (DSSP) TTGGGTSS

TTTS

SS
GGG
SG
 .........430.........440.........450.........460.........470.........480.........490
Sequence LVLPLVPELLSTHPFFDTAEPDMDDPAYIAVLVLIFNAAKTCPTMPALFSDHTFRHYAYLRDSLSHLVPA
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Known secondary structure (DSSP) GGGGGS


SS






SS
TTTSS
SSSTTS

S
SSSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence LRLPGRKLDPSQQFLQQSLERVYSLQHLDPQGAQELLEFTIRDLQRLGELQSELAGVADFSATYLRCQLL
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Known secondary structure (DSSP)


SSS




SS

STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LIKALQEKLWNVAAPLYLKQSDLASAAAKQIMEETYKMEFMYSGVENKQVVIIHHMRLQAKALQLIVTAR
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Known secondary structure (DSSP) T
TTTTS
TTT

SS

TTTTT
SS

 .........640.........650.........660.........670.........680.........690.........700
Sequence TTRGLDPLFGMCEKFLQEVDFFQRYFIADLPHLQDSFVDKLLDLMPRLMTSKPAEVVKILQTMLRQSAFL
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Known secondary structure (DSSP)




TTTTTS
S
TTS
TT



 .........710.........720.........730.........740.........750.........760.........770
Sequence HLPLPEQIHKASATIIEPAGESDNPLRFTSGLVVALDVDATLEHVQDPQNTVKVQVLYPDGQAQMIHPKP
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Known secondary structure (DSSP)












STT
S








SSS




S
SS
TTT
SSS



T
 .........780.........790.........800.........810.........820.......
Sequence ADFRNPGPGRHRLITQVYLSHTAWTEACQVEVRLLLAYNSSARIPKCPWMEGGEMSP
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Known secondary structure (DSSP) TSTT




S

SS





SSS




S








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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