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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cunB_

Fold library idPDB HeaderMoleculeTitle
c7cunB_3.50PDB header: transcriptionChain: B: PDB Molecule: integrator complex subunit 2;


Added to library: Sat Nov 28 08:38:44 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VCLASLSDPELRLLLPCLVRMALCAPADQSQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASK
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Known secondary structure (DSSP)



TT

SSTTTT
SSSTTSTS



ST
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQQLRHKLGGGSGESILVSQLQHGLTKVSESNGEFFFKSSELFESPVYLEEAADVLCILQAELPSLLPIV
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Known secondary structure (DSSP) TSST

TTT
S






ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence DVAEALLHVRNGAWFLCLLVANVPDSFNEVCRGLIKNGERQDEESLGGRRRTDALRFLCKMNPSQALKVR
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Known secondary structure (DSSP) TSTTS



TTSSS
SSS
SS
SSSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence GMVVEECHLPGLGVALTLDHTKNEACEDGVSDLVCFVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSV
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Known secondary structure (DSSP) SSSS





SS
TTTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LWQMRRQLLLELMGILPTVRSTRIVEEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGLKPTE
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Known secondary structure (DSSP) S



TTSSS

STTTSSS




 .........360.........370.........380.........390.........400.........410.........420
Sequence EEAEQLLQLMTSRPPATPAGVRFVSLSFCMLLAFSTLVSTPEQEQLMVVWLSWMIKEEAYFESTSGVSAS
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Known secondary structure (DSSP) TT



S


TTTTSS

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FGEMLLLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSRMKTIFTQEIFTEQVVTAHAVRVPVTSNLS
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Known secondary structure (DSSP) TT
SSSS





SSSSTTTT

TTTS




S

 .........500.........510.........520.........530.........540.........550.........560
Sequence ANITGFLPIHCIYQLLRSRSFTKHKVSIKDWIYRQLCETSTPLHPQLLPLIDVYINSILTPASKSNPEAT
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Known secondary structure (DSSP) S
SSS



TTSSS


SSS

S


TTTTSSTT






T
 .........570.........580.........590.........600.........610.........620.........630
Sequence NQPVTEQEIRFSITAQLLVLYYILSYEEALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQE
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Known secondary structure (DSSP) TT







TTSS







SSSTTTS
T

SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LGGLHSALLRLLATNYPHLCIVDDWICEEEITGTDALLRRMLLTNNAKNHSPKQLQEAFSAVPVNNTQVM
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Known secondary structure (DSSP)

TTS

GGGS
TTS
SSS
TTSSSSSSSS

SSS


SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence QIIEHLTLLSASELIPYAEVLTSNMSQLLNSGVPRRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSIKF
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Known secondary structure (DSSP) TTTS
SSS
TTSTSSS

TSSSSS



SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence VRQQKYTQNDLMIDPLIVLRCDQRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETEQTREELKNALLA
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Known secondary structure (DSSP)
SS



SS
GGGGGSS
SSGGG
TTS




 .........850.........860.........870.........880.........890.........900.........910
Sequence AQDSAAVQILLEICLPTEEDNLLCNLREVQCLICCLLHQMYIADPNIAKLVHFQGYPCELLPLTVAGIPS
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Known secondary structure (DSSP) T






SSS



GGGTT
GG
 .........920.........930.........940.........950.........960.........970.........980
Sequence MHICLDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLAVNVMGTLLTVLTQAKRYAFFMPTL
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Known secondary structure (DSSP) GGGGGGGS
S



TSSSS
TTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence PSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQTRDIDPIITRLQQIKEKGSMDPDVQLCHCIERTVI
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Known secondary structure (DSSP)
GGGTTS

SS
TTGGGG









 ........
Sequence EIINMSVS
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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