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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cunA_

Fold library idPDB HeaderMoleculeTitle
c7cunA_3.50PDB header: transcriptionChain: A: PDB Molecule: integrator complex subunit 1;


Added to library: Sat Nov 28 08:38:03 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARVVQGSPEVPGITVRVLQALATLLSSPHGGALVMSMHRSHFLACPLLRQLCQYQRCVPQDTGFSSLFLK
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Known secondary structure (DSSP)

STTS
SSTS

TTS
SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLLQMLQWLDSPGVEGGPLRAQLRMLASQASAGRRLSDVRGGLLRLAEALAFRQDLEVVSSTVRAVIATL
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Known secondary structure (DSSP)

STTTT
SSSTTSST



S
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RSGEQCSVEPDLISKVLQGLIEVRSPHLEELLTAFFSATADAASPFPACKPVVVVSSLLLQEEEPLAGGK
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Known secondary structure (DSSP) TTTT
SSS




SSSTS

TTSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PGADGGSLEAVRLGPSSGLLVDWLEMLDPEVVSSCPDLQLRLLFSRPSFRPYLLTLFTHQSSWPTLHQCI
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Known secondary structure (DSSP) S

SSTS
SSSSSS
S



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RVLLGKSREQRFDPSASLDFLWACIHVPRIWQGRDQRTPQKRREELVLRVQGPELISLVELILAEAETRS
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Known secondary structure (DSSP) SSS

S

S
T
TTTSSSS
SS


TT


S




TT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QDGDTAACSLIQARLPLLLSCCCGDDESVRKVTEHLSGCIQQWGDSVLGRRCRDLLLQLYLQRPELRVPV
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Known secondary structure (DSSP) S
TT
ST




SSS


GGGGGT


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence PEVLLHSEGAASSSVCKLDGLIHRFINRGADASMACRKLAVAHPLLLLRHLPMIAALLHGRTHLNFQEFR
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Known secondary structure (DSSP)





ST

TTT
TS


TTT



SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QQNHLSCFLHVLGLLELLQPHVFRSEHQGALWDCLLSFIRLLLNYRKSSRHLAAFINKFVQFIHKYITYN
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Known secondary structure (DSSP) SSTTTTTT

SS
TSSSS

S
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence APAAISFLQKHADPLHDLSFDNSDLVMTAAEMAPYMKRLSRGQTVEDLLEVLSDIDEMSRRRPEILSFFS
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Known secondary structure (DSSP) TTGGGT

STTTTTT



GGG

STSS
GGGGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence TNLQRLMSSAEECCRNLAFSLALRSMQNSPSIAAAFLPTFMYCLGSQDFEVVQTALRNLPEYALLCQEHA
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Known secondary structure (DSSP) T
S
S
GGGGGGGS
TTSSSSS
 .........710.........720.........730
Sequence AVLLHRAFLVGMYGQMDPSAQISEALRILH
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Known secondary structure (DSSP) TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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