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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cm9A_

Fold library idPDB HeaderMoleculeTitle
c7cm9A_2.25PDB header: lyaseChain: A: PDB Molecule: dmsp lyase;


Added to library: Sat May 22 08:52:00 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AMKKENLKILAKKAQTIAIVGANYRFATRVLLENLDKMDFTGTIYLVNPRYENIDGVRCYQSLLEIEDTI
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Known secondary structure (DSSP)

GGGS

ST

SSTT

S
TT
STTS
GGG

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence DVVVGLVNPQLMIQVASNASKINAKVLVIPGGGYGESGVEGQNIQNAILERAADSGMRIVGPNCMGYLNM
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Known secondary structure (DSSP)

S
TT
S


SSSTTT
TTT

SSS
BG
 .........150.........160.........170.........180.........190.........200.........210
Sequence HAQFTPYIGTLHRPLRPIKKGPVSIISQSGSVNDAFIASKLGISKIYSTGNEADVQMHDYLNLLAEDPET
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Known secondary structure (DSSP) GGTB

BSS



TTS

S
GGGTSS

TT
SSS
T
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SVIILYIEAIRNHLSFLRALDLCSKNKKPVIAIKVGRTIKSAAVANAHSGALAGDYEIEKLFLEGHGVLF
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Known secondary structure (DSSP)
S

S
TT

S
TT




S
SSTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VEDIDQAVAVALLLSQPYLPTVNTVAALTVSGGQAGILLDLAEDYGVDFPDFSAVTNYEIASKLPELGGL
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Known secondary structure (DSSP) SSTSS


SSSBS
T
B





GGG
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence SNPLDIWGKSSKDFSEVSNICLSSIVKDADIGIITVAIDAPIGQGDHEFDFTSIPAKDLASLRGNSDKPF
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Known secondary structure (DSSP)
SS
SSS
SS
T
TT
S


BTT

GGG

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LYFSHIQTEFDPRVESILDEAGIAVIQGSRNALVACRALFKYKEFLEKNNHTPIYSVEDLSIQKGLKLLH
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Known secondary structure (DSSP) SSSS
B
TT
S








SSS







 .........500.........510.........520.........530.........540.........550.........560
Sequence DNEGRKLLDESGFVSPREQVVTSLQEGVDYAESIGYPVVLKAQGLAHKTDVGGVALNIKSAAKLKKAWGK
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Known secondary structure (DSSP) T



SSS
SSB

SS
SSTGGGT
B


B
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence MEHLNSPYYLIQEMVTDGFETILAYRTDMNYGPVVIFGLGGIYTELFNEVVLAVPPITHKKAEQMVKSIP
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Known secondary structure (DSSP) TTTS

S
B




TTT
STT


SS

TS
 .........640.........650.........660.........670.........680.........690...
Sequence MLWKSIEGYRGNPALDLEALTASIVQMGETAMEKYEEIVEFEINPLSVRVKGVVALDVLASVK
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Known secondary structure (DSSP)
STT




TTT
S
SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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