PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7clvA_

Fold library id	PDB Header	Molecule	Title
c7clvA_	UNK	PDB header: protein transport	Chain: A: PDB Molecule: tim23 isoform 1;

Links to external resources
Added to library: Mon Jan 4 13:09:47 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M S W L F G D K T P T D D A N A A V G G Q D T T K P K E L S L K Q S L G F E P N I N N I I S G P G G M H V D T A R L H P L A G L D K G V E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S T
S
S S
T T T
T T
S S
S T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L D L E E E Q L S S L E G S Q G L I P S R G W T D D L C Y G T G A V Y L L G L G I G G F S G M M Q G L Q N I P P N S P G K L Q L N T V L N H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T T
G G G G T S
S
S
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I T K R G P F L G N N A G I L A L S Y N I I N S T I D A L R G K H D T A G S I G A G A L T G A L F K S S K G L K P M G Y S S A M V A A A C A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S T T T T T T
S
T T T T T T T T T
S S S
T

. . . . . . . . . 220 . .

Sequence V W C S V K K R L L E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	W	L	F	G	D	K	T	P	T	D	D	A	N	A	A	V	G	G	Q	D	T	T	K	P	K	E	L	S	L	K	Q	S	L	G	F	E	P	N	I	N	N	I	I	S	G	P	G	G	M	H	V	D	T	A	R	L	H	P	L	A	G	L	D	K	G	V	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T					S						T					S			S	S			T					T	T									T	T		S	S							S	T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	D	L	E	E	E	Q	L	S	S	L	E	G	S	Q	G	L	I	P	S	R	G	W	T	D	D	L	C	Y	G	T	G	A	V	Y	L	L	G	L	G	I	G	G	F	S	G	M	M	Q	G	L	Q	N	I	P	P	N	S	P	G	K	L	Q	L	N	T	V	L	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S			S	S		T	T	T		G	G	G	G	T	S																								S					S		S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	T	K	R	G	P	F	L	G	N	N	A	G	I	L	A	L	S	Y	N	I	I	N	S	T	I	D	A	L	R	G	K	H	D	T	A	G	S	I	G	A	G	A	L	T	G	A	L	F	K	S	S	K	G	L	K	P	M	G	Y	S	S	A	M	V	A	A	A	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S					S	T	T	T	T															T	T					S		T	T	T	T	T	T	T						T	T			S	S	S		T
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	V	W	C	S	V	K	K	R	L	L	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S