Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cebA_

Fold library idPDB HeaderMoleculeTitle
c7cebA_2.89PDB header: cell adhesion/immune systemChain: A: PDB Molecule: integrin alpha-6;


Added to library: Sat Jun 26 08:35:20 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLLLVGAPRAEALPLQRANRTGGLYSCDITARGP
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)

B


TTT


TTS
TTS
SS

TT
B

TTSSSSB
BTTS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CTRIEFDNDADPTSESKEDQWMGVTVQSQGPGGKVVTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRI
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)








TTT
TT


STT

TT
STTSTT




SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQDGPYEVGPVPAN
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)
SSSSSS
B
TTTTS

STTTTTT

TTSS
TTSS
TTTB








SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDL
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)

BTSSSSSSSSTTGGGTB
SSSSB
SSTT

BTS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NKDGWQDIVIGAPQYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDI
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP) T
SSS
TT


SS






STT

TT



STT

TTS
TT
SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AVGAPYDDLGKVFIYHGSANGINTKPTQVLKGISPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSR
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TTSTT
TT
SSSS
SSSSSS
SSS
B
 .........430.........440.........450.........460.........470.........480.........490
Sequence PVINIQKTITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISIVGTLEAEKESSRVQFRK
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
SS

TT


SSS
TTS
SSSS



B
B








 .........500.........510.........520.........530.........540.........550...
Sequence YTQELTLKRQKQKVCMEETLWLQDNLRPIPITASVEIQEPLPEVLPILNSDEPKTAHIDVHFL
Predicted secondary structure


























SS confidence






























































Known secondary structure (DSSP)

B
STT










B









TTS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D