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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7c5fP_

Fold library idPDB HeaderMoleculeTitle
c7c5fP_1.88PDB header: oxidoreductaseChain: P: PDB Molecule: glyceraldehyde-3-phosphate dehydrogenase;


Added to library: Sat Sep 26 08:34:42 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSKVGINGFGRIGRLVLRRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGK
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Known secondary structure (DSSP)



STT
S

SS


TTT
S
SS
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYNVNDDTLDG
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Known secondary structure (DSSP)

SSGGG

GGGTT


SSS

STT
SSS

SSS
B

TTTTGGG

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTG
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Known secondary structure (DSSP) T







TTSBSSS


TT
SGGGSBGGG




 .........220.........230.........240.........250.........260.........270.........280
Sequence AAKAIGLVIPELSGKLKGHAQRVPVKTGSVTELVSILGKKVTAEEVNNALKQATTNNESFGYTDEEIVSS
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Known secondary structure (DSSP) TTTTGGGTSGGGTTTS
SS
SS


TTT
SS
S


GG
 .........290.........300.........310.........320.........330...
Sequence DIIGSHFGSVFDATQTEITAVGDLQLVKTVAWYDNEYGFVTQLIRTLEKFAKL
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Known secondary structure (DSSP) GGTT
SSSGGG
TT
TT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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