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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7bwmA_

Fold library idPDB HeaderMoleculeTitle
c7bwmA_2.90PDB header: structural proteinChain: A: PDB Molecule: adhesin p1;


Added to library: Sat Oct 31 08:44:34 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NAINPRLTPWTYRNTSFSSLPLTGENPGAWALVRDNSAKGITSQQTTYDPTRTEAALTASTTFALRRYDL
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Known secondary structure (DSSP)

S
TT


BTTTTB

TTS

TT














T
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGRALYDLDFSKLNPQTPTRDQTGQITFNPFGGFGLSGAAPQQWNEVKNKVPVEVAQDPSNPYRFAVLLV
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Known secondary structure (DSSP) TS

TTT




B
B
TT

B
TTT
B
S


TTTTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence PRSVVYYEQLQRGLGLPQQRTESGSTTGAMFGLKVKNAEADTAKSNEKLQGAEATSTQRGGGDTKVKALK
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Known secondary structure (DSSP)
TGGGT








S





TT

TT






GGGGGGS




TTS



S


 .........220.........230.........240.........250.........260.........270.........280
Sequence IEVKKKSDSGQLQLEKNDLANAPIKRSEESGQSVQLKADDFGTALSPTPWRPWLATEQIHKDLPKWSASI
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Known secondary structure (DSSP)

S



STTSGGG

S

TT



GGGG










SS
TS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LILYDAPYARNRTAIDRVDHLDPKAMTANYPPSWRTPKWNHHGLWDWKARDVLLQTTGFFNPRRHPEWFD
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Known secondary structure (DSSP)
TTSSB


TSS
GGGGSTT

TTTT


SSS
TTT
GGG
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence GGQTVADNEKTGFDVDNSENTKQGFQKEADSDKSAPIALPFEAYFANIGNLTWFGQALLVFGGNGHVTKS
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Known secondary structure (DSSP) TTTTT
SS


SB

S
SSTTTTT
B


STT







T


TT



STTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence AHTAPLSIGVFRVRYNATGTSATVTGWPYALLFSGMVNKQTDGLKDLPFNNNRWFEYVPRMAVAGAKFVG
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Known secondary structure (DSSP) TT



B

TTS

TTT

STT
SS
SS
S



TT





T
 .........500.........510.........520.........530.........540.........550.........560
Sequence RELVLAGTITMGDTATVPRLLYDELESNLNLVAQGQGLLREDLQLFTPYGWANRPDLPIGAWSSSSSSSH
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Known secondary structure (DSSP) T

B

TT
S
B
TT
GGG
TT
S


S
B

GGGBBS
S


GGGSS
SSS
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence NAPYYFHNNPDWQDRPIQNVVDAFIKPWEDKNGKDDAKYIYPYRYSGMWAWQVYNWSNKLTDQPLSADFV
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Known secondary structure (DSSP)
TTTS
B

GGG




TTTTTTSTTTTT
S





S



SSTT

S

 .........640.........650.........660.........670.........680.........690.........700
Sequence NENAYQPNSLFAAILNPELLAALPDKVKYGKENEFAANEYERFNQKLTVAPTQGTNWSHFSPTLSRFSTG
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Known secondary structure (DSSP)

B
SS


TTS
SS



GGGS

SSS

S




TT

GGGSGGG
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence FNLVGSVLDQVLDYVPWIGNGYRYGNNHRGVDDITAPRSFLPTFSNIGVGLKANVQATLNLQLWTGAGWR
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Known secondary structure (DSSP)



SB
TTTS
BTTTT

GGGSSS






SS

TTSS



S






SSB
 .........780.........790.........800.........810.........820.........830.........840
Sequence NDKASSGQSDENHTKFTSATGMDTSAGNPDSLKQDNISKSGDSLTTQDGNAIDQQEATNYTNLPPNLTPT
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Known secondary structure (DSSP)

B
SSSSSB
SSS




TT
TT




B

TTS


S

S

SSSS

BSS
S
SB
STT
 .........850.........860.........870.........880.........890.........900.........910
Sequence ADWPNALSFTNKNNAQRAQLFLRGLLGSIPVLVNRSGSDSNKFQATDQKWSYTDLHSDQTKLNLPAYGEV
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Known secondary structure (DSSP)


TT
GGG



T



B

STT



GGG



TT
STTS



SSSB
 .........920.........930.........940.........950.........960.........970.........980
Sequence NGLLNPALVETYFGNTRAGGSGSNTTSSPGIGFKIPEQNNDSKATLITPGLAWTPQDVGNLVVSGTTVSF
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Known secondary structure (DSSP) TTS

STTTTT
SGGGS
S


B




TT








TT
B


TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QLGGWLVTFTDFVKPRAGYLGLQLTGLDASDATQRALIWAPRPWAAFRGSWVNRLGRVESVWDLKGVWAD
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Known secondary structure (DSSP) TT
SSSS

TTB



TTST
SSTTTT
SSS
T
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence QAQSDSQGSTTTATRNALPEHPNALAFQVSVVEASAYKPNSTNSSPYLHLVKPKKVTQSDKLDDDLKNLL
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Known secondary structure (DSSP) T

S
SS





S
TT





GGGGS






TTSS







TTS


GGG
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DPNQVRTKLRQSFGTDHSTQPQPQSLKTTTPVFGTSSGNLSSVLSLSPVEKVSGWLVGQLPTNNLAPNTN
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Known secondary structure (DSSP) ST





SS

S




TTTTB



T



SS



S
 .........1200.........1210.........
Sequence TGNDVVGVGRLSESNAAKMNDDVDGIVRT
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Known secondary structure (DSSP)
S
TTTS

STTSS

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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